| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3659 |
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| Symbol | |
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| ID | 3518804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3802875 |
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| End bp | 3804053 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286107 |
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| Product | putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_270327 |
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| Protein GI | 71278587 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.237291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCCA TCACGCCTTT AAATGTAAAA AGCATAGAAT TTATACAAGC CCAAATTGAT
AACAAAACTA AACCATTAGG TGCATTAGGG GCACTAGAGC CTTTGGCGCT GCAACTTGCT
TTGATCACTA ATCAAAGGCA TCAAAAAAAT TCAGATTGTA ATGACTCAGA CTTTAGTCAT
TCTGAGCTAG AGAGTTCTAG CCAAATCAGT ATAAATAATC CTGTTATGTT AGTTTTTTCT
GGTGACCACG GTATTAATGA TAATAATGTT AGTATTGCGC CCAGTGCAGT TACTAAACAG
ATGGTACTAA ATTTTTTAAT GGGTGGTGCT GCGATAAATT GTTTTTGTCA AAGTAATGAT
ATCGCTTTAA CTGTGGTCGA CTGCGGTATA TTACAGCCTA TTTCCGCTGA TGAAGTCCCT
CAAGTTGCAA GCAAAACAAT GAATAGTGTT AACTTTATTG AGCAACGACT TGGTGCAGGA
ACAAATGATT TCTCAGTTGA AAGCGCTATG TCTATCATAG CGGTAGAGCA AGGATTCGAC
TATGCAAGAC AACTGGTTGA AGCACAAGTT AAGCAAGGTG CTGAGATATT GTTATTAGGT
GAAATGGGCA TTGCCAATAC CAGTTCAGCT GCTGCATTAA TGTCGGCTTT AACTTTATCT
AGTGTTCCTG AGTGTGTTGG TCGGGGTACC GGTATTACTG ATGAGCAATT AGAGAAAAAA
ATAGCCTTAA TTGAAAGCGC ACTTCAACGC GTTAAAGTAT CAGAGAAGAA TGTTGAAAAT
TTAACTCAAG ATGAGATTAT ATTGCTGTTA TCTGAGTTAG GCGGTTTTGA GATAGTTCAA
ATGGTCTCTG CTATATTATC AGCGGCGACT GCTAGTATAC CGGTTGTTAT TGATGGCTTT
ATTGTCAGTG TCGCTGCTTT AGTTGCACTG CGCTTAGATA AAGATGTGGC TAACTATTTA
ATTTTCTCTC ACGTTTCTCA AGAAAATGCC CACCAAAAAT TGCTTGAAGA ACTGATCTCG
GCGCAAACAT TTAATGAGTC AAGCAGCCAA CCTTTATTGA ATTTAGGTCT TCGCTTAGGA
GAGGGAACAG GTGCCGCACT TGCTTTTCCT TTAATAAAAG CCTCTGCAAG TTTTTATAAT
AATATGGCCA GCTTTGAAAG TGCAGGTGTT ACGGTATGA
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| Protein sequence | MIPITPLNVK SIEFIQAQID NKTKPLGALG ALEPLALQLA LITNQRHQKN SDCNDSDFSH
SELESSSQIS INNPVMLVFS GDHGINDNNV SIAPSAVTKQ MVLNFLMGGA AINCFCQSND
IALTVVDCGI LQPISADEVP QVASKTMNSV NFIEQRLGAG TNDFSVESAM SIIAVEQGFD
YARQLVEAQV KQGAEILLLG EMGIANTSSA AALMSALTLS SVPECVGRGT GITDEQLEKK
IALIESALQR VKVSEKNVEN LTQDEIILLL SELGGFEIVQ MVSAILSAAT ASIPVVIDGF
IVSVAALVAL RLDKDVANYL IFSHVSQENA HQKLLEELIS AQTFNESSSQ PLLNLGLRLG
EGTGAALAFP LIKASASFYN NMASFESAGV TV
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