Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3658 |
Symbol | cobS |
ID | 3521655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3801991 |
End bp | 3802878 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286106 |
Product | cobalamin synthase |
Protein accession | YP_270326 |
Protein GI | 71281184 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0368] Cobalamin-5-phosphate synthase |
TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.095174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTAT CAGTGAATGA GCCGCTAAAA AATAAAGTAG CTGCGCAGCT GAATTTATTT TATTTAGCGT TAAGCTTTTT TACTCGTTTG CCTGTTCCTA AAACCATGCA TTATTCAGAA GCATTATTAA ATAAAGCTAA TCGATACTTC TCCTTAGTAG GCTTAGTCAC TGGTTTACTG CTCGCGTTAA GTTATGTCTG TTTTAGTACC TTTTTACCCG CCAATATATC TATATTGTTA ACTATGACGA TAAGCTTGTT ATTAACAGGC GCTTTTCATG AAGATGGTTT AGCTGATATG GCTGACGGTA TCGGTGGTGC TTTCACCATA GAAAAACGAC TGACTATTAT GAAAGATAGT CGTATCGGCA CTTATGGTGC CGTTACCTTA GTGATGGCTT TATTATTAAA ATTTACATTA CTGGTAAAAC TAGCTGAGCA AGATAGTAAT CACTTACTTT TAGCTATTTT ATTAGCAGAG GTTTTATCCC GAGCGGTTGC TGGCAGCTTA ATCTCATCTA TGCCCTATGT AAGTGATATT GAACAAAGTA AGAGTAAACC ATTAGCCCAA GCACAATCCT CATCAGAATT AACTATTTTG CTCTTGATAG GTCTCGCTCC GCTCATTTTT TATTCTAGTG AAGTGATTTT CTCGTTGTTG ATCGTTTTAG TGTTGTTTCG TTGGCTTTTT AAGCAATGGC TTATGGCGAG GATAGGAGGT TTTACTGGTG ACTGTTTAGG TGCCGGGCAG CAACTCTCTG AGTTACTTAT CTATTTAACG ATCGTTTCTT ATATTAATAA AGATGTATTC ATAGAAGTTG CTCTTACGGG GCACAACTTT ATGGGACATA GCCTCACAGG ACACAGTTTT ATGGGAATAG TCGGATGA
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Protein sequence | MSVSVNEPLK NKVAAQLNLF YLALSFFTRL PVPKTMHYSE ALLNKANRYF SLVGLVTGLL LALSYVCFST FLPANISILL TMTISLLLTG AFHEDGLADM ADGIGGAFTI EKRLTIMKDS RIGTYGAVTL VMALLLKFTL LVKLAEQDSN HLLLAILLAE VLSRAVAGSL ISSMPYVSDI EQSKSKPLAQ AQSSSELTIL LLIGLAPLIF YSSEVIFSLL IVLVLFRWLF KQWLMARIGG FTGDCLGAGQ QLSELLIYLT IVSYINKDVF IEVALTGHNF MGHSLTGHSF MGIVG
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