| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3647 |
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| Symbol | |
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| ID | 3522947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3791791 |
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| End bp | 3793230 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637286095 |
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| Product | peptide/proton symporter family protein |
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| Protein accession | YP_270315 |
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| Protein GI | 71282472 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAC CTAATGCAGG TACCTTGTTT GGCCACCCAA AAGGACTTTT CCTTTTATTT
GGTACTGAAA TGTGGGAACG TTTCGGTTAT TACGGCATGC GTGCCCTATT GGTACTTTAT
CTTATTGCCT CTGTTCAAGA CGGCGGTTTT GGCTGGACCA ATCAAGAAGC GTTAAGGCTC
TATGGCTTTT TCACTATGGC TGTTTATTTA ACACCGGTAA TAGGTGGCTG GTTAGCTGAT
AACTATATTG GTCAGCGTAA AGCAATTATC TGGGGCGGGA TAATTTTTTC ATTAGGTTAT
TTTACCCTAG GTATTCCAAA GTCAATGATT GTTGGCATGG AAGAAACGGT ATTTTACCTT
GGTTTAGCAC TTATTATTAC GGGTAATGGT TTATTTAAAG CCAATGTTTC TAGTTTGGTG
GGCGAGCTTT ATGACGATGG CGATCACAGA CGTGATGCTG CTTTCACTAT TTTTTATATG
GGCATCAATT TAGGTGCTTT TTTAGCGCCA ATAACTGTCG GTATATTAGG TGAGCAAGTT
AACTGGCACT ACGGCTTCAT CTTAGCAGGT TGTGGTATGT TGATTGGTTT GGCCCTTCAG
CTTACTTTAG CTAACAAATA TTTAGGTGAT ATTGGCGTAG TTCCATCAGC TAAGCGCACT
AAAGGAGAGC AAAAATCTCA TGCACCATTA ACGTCTCAAG ATATGGACCG CATGAAAGTT
ATCTTGATCA TGAGCATGTT CTCAGTTGTT TTCTGGGCGG GTTTTGAGCA AGCAGGTGGC
TTATTCACTA TCTATGCTTC TGATTTTACT GACCGTACTC TCTTTGGTTT TGAAATCGCT
GCTTCTTCAT TTCAATCATT AAACGCTATG TTCATTATTT TATTAGCACC TTTTGTTGCC
TCAGTTTGGG TTAAGATGGG TTCAAATGAA CCGACTTCTC CGAAGAAATT TGCTTTGGCG
ATGTTGTTTT TAGCCTTAGG TTTCTTCGTT ATGTTCTGGG CTACTATGGT TCAAGGTGGT
GATGTTGCTG TTAAAGTGAG CATGTTGTTT CTTGTTTTTG CTTACCTATT TCATACCTTG
GGTGAATTAT GTTTATCACC AATTGGTTTA TCGCTGGTAA CGAAATTAGC CCCACTTAAA
TTTACGTCAT TATTAATGGG TATTTGGTTC TTCTTTACAG CCTTATCTAA CTTCTTAGCC
GCATTTATTG GTTCATTCGT TGGTGAAGGT GAAGAAATGG TTAATAATGC AGCAAACATC
TTTATGGGTG TTGGTGTCGG TGCTTTAATT ACTGGTCTTA TCATCTACCT ATCTGCTGGT
AAGTTAGTTG AATGGATGCA TGGTGCAGAA GGCGATATTC CTTCTAATTT AGAAGAGAAA
ATCGAACAAG AAATATCAGT TACCGGTACT CACGAAGGTG TTGCTGAAAC TCATAACTAA
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| Protein sequence | MTQPNAGTLF GHPKGLFLLF GTEMWERFGY YGMRALLVLY LIASVQDGGF GWTNQEALRL
YGFFTMAVYL TPVIGGWLAD NYIGQRKAII WGGIIFSLGY FTLGIPKSMI VGMEETVFYL
GLALIITGNG LFKANVSSLV GELYDDGDHR RDAAFTIFYM GINLGAFLAP ITVGILGEQV
NWHYGFILAG CGMLIGLALQ LTLANKYLGD IGVVPSAKRT KGEQKSHAPL TSQDMDRMKV
ILIMSMFSVV FWAGFEQAGG LFTIYASDFT DRTLFGFEIA ASSFQSLNAM FIILLAPFVA
SVWVKMGSNE PTSPKKFALA MLFLALGFFV MFWATMVQGG DVAVKVSMLF LVFAYLFHTL
GELCLSPIGL SLVTKLAPLK FTSLLMGIWF FFTALSNFLA AFIGSFVGEG EEMVNNAANI
FMGVGVGALI TGLIIYLSAG KLVEWMHGAE GDIPSNLEEK IEQEISVTGT HEGVAETHN
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