| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3645 |
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| Symbol | |
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| ID | 3520624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3788646 |
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| End bp | 3791408 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637286093 |
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| Product | polysaccharide biosynthesis/export protein |
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| Protein accession | YP_270313 |
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| Protein GI | 71280160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.712772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACCG CTATTGAAAA TTTTTTTAAG AATAACAACG TTAATGTTGT AAAATCTTTA
TTTGGTATTT TACTGATATC GACTTTCCTC CTTGCTAATT TACCTTTGAA AGCGCTTGCT
GCAAATCAGA TAAGCCAACA GCAAATGGAG CAATTTAAAA AATTACCTCC TTCGCAACAA
GAAGCGCTTG CTAAAAGTAT GGGCGTTGAT CTAAACAGTA TAAAAGGTCA ATTATCGAAA
GGGGGTTCTA GTGAAGAAAA AAAGAATACA GAGACCTTCC CACGTGGAAC TCAATTTGAT
GCTGAAGGAA ACCCTATTTC TGAAGAAGAA TTAGAGAAGC TAGAAAATAG CGATGAACTC
AAACCTTTTG GTTATGATGT TTTTGCTAAT TCACCGCAAA CCTTTGCCCC TATGATGGAT
ATTGCTATTC CTGCAGACTA TATCATTGGT CCAGGTGATA ACATTTCTAT TCAAGTATTT
GGTAAAGAAA AAGATGAACT TGAATTAACG GTAAACCGTG AGGGACAAAT TATTTTTCCT
TCTCACGGGC CTTTTACTGT TTCAGGTTTA TCATTTAATG AAATGAAGCG TTTGTTGACC
GCACGAATTA AAGAAAAAGT TATTGGTGTT GATGTTGTTG TCGGTATCGC TTCTTTGCGC
TCTATGCGTG TTTTTGTTTT AGGTGACGCT CATAAACCAG GGCCTTATAC TTTAAGTTCA
TTATCTAGTA TTACCCATGC TATTTTTGCG GCTGGCGGTA TTAGTGATAT CGGTAGTTTA
CGTAATATAC AACTTAAACG TGCTGGTAAG TTAGTTACCA CCCTAGACCT ATATGACTTG
TTGATTAAAG GTGATTCACG TAGCGATGTA CTATTGCAAT CTGGTGATGT TATTTTCATT
GCACCTAAAG GCAATACTAT CAGTATTGAA GGTGAAGTTC GACGCCCAGC TATTTATGAA
TTAAGCCAAA ACGAAAACTT TAATGATGTT TTGGCTATGT CCGGTGGGCT TTTACCTACA
GCCTTTGCTA AAACAACTCG TGTTGAACGT TATAATCAAG ACTCCTTACG TACTGTTGTT
AATATTGATC TGACTAAAAA AAATGACTTA GCTAAAAAAG CACATGCAGG TGATGCGGTT
TATGTGATGA AAGCTGCTGA GATGTTTGAA CAGTCTATCA CTGTTATCGG TGCAGTAACC
CGTCCTGGAA AATACCAATG GCAAACCGGT CAGCGTATCA CGGATATCTT CCCTAATATC
GACTCTCATT TATTACATTC GGCCGACCTT AATTATTCTA TTGTTGTGCG TGAAATTGAT
ATTGCCCGTA ATATTGAAAT CTTACAATTT GATTTAGCTA AAGCTATTTC AGCGTCAAAC
TCAAAAGATA ATATTATTTT ACAAGGCAAC GATAAGATCA TAGTTTTTGC CAACATCATT
AAATTAATTG ACAGTAAAAT CAACTTAGAT TCTTTGGCTT TTACTCAAGA TAACCTCACC
AAAAAAGAAC AAGATTTAGC GAAAGAGAAA TATAAACAAA AACAATTTTG GTTGAAATAC
GGCGATAGTG AGCAAGTCGC TCAATTTGAT AGTGAAGAAG CTGCTGCAGC TAAATTAGTT
GAACAATCTA TAGCTCAGTT TAGTGGTGGA GAATTAGAAG AAGAACTTGA TCCTAAAGAA
TTAACAATTT TTTCTCGTCA ACGTTTATTA ATGCCTATTA TTGAAAAATT AAAACGTCAA
GGCAAGTCCG GTCAACCAAT TCAATTAGTT GAAGCGGACG GTGAAGTGAA GTTTCCAGGG
ATATATCCTT TAGCTAAAAA TGCCCGTGTA TCTGATTTAA TTGCCGCTGC AGGCGGCTTA
ACTGAGTCGG CTTATGTGGT ACGTGCTGAG GTTTCTCGTA ATCAGATTAT TAATAATAGA
GCACAACAAA CGTCGCTAAT GTTTAGTTTA AGTGGGGCTC TTGCTGGTGA TGAAAAAGAT
AATGTTATAT TAAACTCAAA AGATAGGTTG AATATTCATC AAGTTCCAGC CTGGAGTGAA
AACAGCGTTG TTGAGCTACG AGGTGAATTT GTCTTTCCGG GTAAATATAC CGTACGTCGT
GGTGAGAGTT TGGCCGACTT AATAACTAAG GCCGGTGGTT TTACCAAATT TGCCCATCAA
GAAGGCTCTG TTTTTACGCG GGTGCAATTA CGCGAAATTG AGCAACAGAA CTTGTTAAAA
TTGACCGCAG ATTTACGTAT AGAAATGGCC TCTAAATCCA TGTCTGATCA AAACTATTCG
CAATCTTATG CTGAAGTACA GCAAATGTTA GCAGATATGG CTAATGTACA GCCCGTTGGA
CGTCTAGTGC TTGATTTACC TAGGGTAATG AATAACAAAA GCTATGACGT TCTTCTTGAA
GGTGGTGATG TGTTATATGT TCCTACTTTG AAAAATTCTA TTAACGTTGT CGGCCAAGTA
CAAGTCACTT CATCACATAT ATACGATATT AATTTATCAG CAGATGATTA TTTATCTCAA
AGTGGTGGTA GCAAAAAACG TGCAGATGAA GACCGAATTT ATATTATTTC TGCCAATGGT
AGTATTAAAA TGATGGACAG CGGTAATTGG TTTAGCAGTG ATTCCGGTGA TAACTTAAGA
CCAGGTGATA CCATCGTTGT ACCACTTGAT GCTGAGTATA TGAATAACTT AGCATTGTGG
ACCAGTGTAA CAGGCATCAT CTACAATTCG GCAGTGGCAA TTGCTGCTAT CAGCGGTATT
TAA
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| Protein sequence | MITAIENFFK NNNVNVVKSL FGILLISTFL LANLPLKALA ANQISQQQME QFKKLPPSQQ
EALAKSMGVD LNSIKGQLSK GGSSEEKKNT ETFPRGTQFD AEGNPISEEE LEKLENSDEL
KPFGYDVFAN SPQTFAPMMD IAIPADYIIG PGDNISIQVF GKEKDELELT VNREGQIIFP
SHGPFTVSGL SFNEMKRLLT ARIKEKVIGV DVVVGIASLR SMRVFVLGDA HKPGPYTLSS
LSSITHAIFA AGGISDIGSL RNIQLKRAGK LVTTLDLYDL LIKGDSRSDV LLQSGDVIFI
APKGNTISIE GEVRRPAIYE LSQNENFNDV LAMSGGLLPT AFAKTTRVER YNQDSLRTVV
NIDLTKKNDL AKKAHAGDAV YVMKAAEMFE QSITVIGAVT RPGKYQWQTG QRITDIFPNI
DSHLLHSADL NYSIVVREID IARNIEILQF DLAKAISASN SKDNIILQGN DKIIVFANII
KLIDSKINLD SLAFTQDNLT KKEQDLAKEK YKQKQFWLKY GDSEQVAQFD SEEAAAAKLV
EQSIAQFSGG ELEEELDPKE LTIFSRQRLL MPIIEKLKRQ GKSGQPIQLV EADGEVKFPG
IYPLAKNARV SDLIAAAGGL TESAYVVRAE VSRNQIINNR AQQTSLMFSL SGALAGDEKD
NVILNSKDRL NIHQVPAWSE NSVVELRGEF VFPGKYTVRR GESLADLITK AGGFTKFAHQ
EGSVFTRVQL REIEQQNLLK LTADLRIEMA SKSMSDQNYS QSYAEVQQML ADMANVQPVG
RLVLDLPRVM NNKSYDVLLE GGDVLYVPTL KNSINVVGQV QVTSSHIYDI NLSADDYLSQ
SGGSKKRADE DRIYIISANG SIKMMDSGNW FSSDSGDNLR PGDTIVVPLD AEYMNNLALW
TSVTGIIYNS AVAIAAISGI
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