Gene CPS_3631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3631 
Symbol 
ID3519293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3771043 
End bp3773211 
Gene Length2169 bp 
Protein Length722 aa 
Translation table11 
GC content37% 
IMG OID637286079 
ProductGGDEF domain-containing protein 
Protein accessionYP_270299 
Protein GI71279208 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2703] Hemerythrin 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.770761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTCG GCATTGATAG CCTAGATAAC GACCATAAAA AGCTCATTGC CATTTTAGCG 
CAATTGATGT CTGCCAAAAA TGAAAAGCTT GGACAGGATG ATATTGATGT TATTTTTGAA
AGACTTGAAG GTTATTGCCT ATCACACTTT GCTCGAGAAG AAGCCTTACT AGCTAAAATT
GACTATAAGC AGCTTGAGGC TCATAAATTG AGTCACCAAG CGTTTATTAA AAAAATACCA
CAGTTGAAAG AGCAGTGGTT TGCCAAGGTT ACGGAATCTG AGGCAGTAAA AGATAAAATT
ATCTTATTTT TACAGCAATG GTTAATAAAG CATATTTTAG AAGAAGATCT AGACTATGTA
CCTGCCATAC ATTGCTTTCA AGAGTTCAGT CGTTATGAAA AAGATAAAAA AGCCAAACAC
CCTTGGTTAA GATTTTTCTC CATAAAACTG TCTCACTGTC TTATTTTAAG CCACCGAGTT
TTAATCACAA CACTACTGCC TGTTGCAGCA GTGTTACTAC TTTGTTTCTT TATACTTAAA
GACAACTACC AACGCTATGA CAGTATTTCT AAGGTATTAG GTCTTAATTC TGTTATCGAG
CAAGTCAATG GTATTAGTCA CTCATTACAA GCCGAGCGAG GTTTATCTAC CGGTTACACC
AGTTCAAACT ATAGAAGTTT TGCTAAACAA CTAAGACAAC GCCGAAAAAG TACAGATGCT
AAAATCCAAT ACTTTTTATG GTTACTAGAG CAGTCTGCTA ACCAAGAAAT AAAAGTAAGT
GTTAGTCGTT ATATGACTAA TTTTCAGGAA ATAGTAGCGA ACTTGTCGCG TCACAGAATG
CATTTAGACC AGAAAATTGT TGGTTTTGAA GAAACTTATC ATGCTTATAC CCAATTAATT
GGACAACTTC TGTCGGTATC TGACCATTTG GTCCATATAG AAATAGGCTC AAGTCACGCC
AATGATATTT CAGCCATTAA TGCCATACTA CGTTATAAAG AGTTTATGGG GCAAATCCGT
GCTATTGGTA TGAAAATGGC TGAAAACCAT CAAGAAAATA TTTATGGAAA TGTTGAAGTT
AGTTTATTGA TAGGAAAACA ATTAAATACC TTGCTCATAT TTAAAAATGC AGCAAATTCA
GCTCAAAAGT CAATCTGTGG CCACTATTGT GATGCTTTTG CGCTGCGACA ACACTTAGAG
TCTTCTTATC TAGAAACAAT GCAGTTTGAA GATAAAGATG TCAGAGCCGC AAGATGGTTC
AAGGTGATGT CAGCAAAAGT CGATAATTTA AATAGCGTGG TTCAAAGACT CATTAACGAA
TTTGATGGGC AAATATACAT TGAAAGTCAA AAATTGAAAA AAGAAGGTTA TTTGATCATT
CTTGCCATGT TGATATTTTT GTTGGTGGCT ATATTCTTTG CGTTAGTGCT TAATTACAGC
ATTATTAGCC CAGTAAGAAA ACTCACCTAC GCATTAAATG ATATGTCTGA AGGGCAGAAT
AACATTCACT TTAACCATAT TGATAGCAAA GATGAAATTG GATCTATGCA ATTAGCTTTT
GAAAAGCTTC GCCGGAAATT GCTTCAAGGT GATGTGTATA AAGCGACAGT CAGTCAGCAG
CAGAAAGAGA TTAAATACCG AAAGTCTCAA CAGGATCATT TTCAGCAACT AGCCTTGACT
GATGCTTTAA CCGGTGCTGT TAATCGCCAC CACTTTAACG AGGTACTTGA TCAAGAAATA
GCCAATGTTA ATAACCATGG CAGCCCATTA TCTATTATGC TGTTAGATAT TGATCACTTC
AAAAGTGTCA ATGACCGTTA TGGTCATGGT GTAGGAGATG AGGTCTTGGT AATGTTCTAT
CAAACGTGCG TTGAAGCAGT TCGAAGTAGT GACGTTGTTG CCCGTATTGG TGGTGAAGAG
TTCGTGATTA TTATGCCAAA TACTCAGTTG GTCAATGCCC AAAAGTTTGC TGAACGTTTA
CGCCAAAAAA TAGCAAAACT TGAATTAAAT ATTGCCAATA ATCAAATATC TGTAACGGTT
AGCATTGGGG TGAGTCAGTG GCAAAGTGAA TATTTTACCA ATGCTGAAAC TTTTGTAGCC
CATGCGGATA AATCTCTCTA TCAAGCAAAA AATAGTGGCA GAAATAAGGT TGTCGTTGCT
CAACAGTGA
 
Protein sequence
MSVGIDSLDN DHKKLIAILA QLMSAKNEKL GQDDIDVIFE RLEGYCLSHF AREEALLAKI 
DYKQLEAHKL SHQAFIKKIP QLKEQWFAKV TESEAVKDKI ILFLQQWLIK HILEEDLDYV
PAIHCFQEFS RYEKDKKAKH PWLRFFSIKL SHCLILSHRV LITTLLPVAA VLLLCFFILK
DNYQRYDSIS KVLGLNSVIE QVNGISHSLQ AERGLSTGYT SSNYRSFAKQ LRQRRKSTDA
KIQYFLWLLE QSANQEIKVS VSRYMTNFQE IVANLSRHRM HLDQKIVGFE ETYHAYTQLI
GQLLSVSDHL VHIEIGSSHA NDISAINAIL RYKEFMGQIR AIGMKMAENH QENIYGNVEV
SLLIGKQLNT LLIFKNAANS AQKSICGHYC DAFALRQHLE SSYLETMQFE DKDVRAARWF
KVMSAKVDNL NSVVQRLINE FDGQIYIESQ KLKKEGYLII LAMLIFLLVA IFFALVLNYS
IISPVRKLTY ALNDMSEGQN NIHFNHIDSK DEIGSMQLAF EKLRRKLLQG DVYKATVSQQ
QKEIKYRKSQ QDHFQQLALT DALTGAVNRH HFNEVLDQEI ANVNNHGSPL SIMLLDIDHF
KSVNDRYGHG VGDEVLVMFY QTCVEAVRSS DVVARIGGEE FVIIMPNTQL VNAQKFAERL
RQKIAKLELN IANNQISVTV SIGVSQWQSE YFTNAETFVA HADKSLYQAK NSGRNKVVVA
QQ