Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3627 |
Symbol | |
ID | 3520922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3764523 |
End bp | 3765446 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286075 |
Product | epimerase family protein |
Protein accession | YP_270295 |
Protein GI | 71280456 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.586938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA TACCACTAAA TAATGATTTT GCTCAAGTTA CTTCAATTAC ACTAAACCAA GAAAGTGGTG AAGAGCGGTT TGAGGGACTT AATATTTCTC ATGCCTATTG CCAAGCAAAG GTAAGTTTAT ACGGTGGGCA AGTCTTAAGC TTTAAACCCA GTGGTCATAG GGATGTTTTG TGGTTAAGTG AACAAGCTAG TTATCAAATG GGTAAAGCTA TTCGTGGTGG TATCCCTTTG TGCTGGCCTT GGTTTGGTGC TAATGATAAA CAAAGTCAAT ATCTCACAGA AAATCCAAAC ACAGCATTAA AACCAGTGAA TCATGGTTTT GCTCGTCAAT TGCCATGGCA CATAACAAGC ATTAATGCTG ATGAGAGCGG TGTTACTTTA GTTTTAGTGT TAAGTGGTGA TAAGCAACAC CCGCTCTGGC CTAATGCGTA TACCTTAACG CAAACCTTAT TTTTTGGTAA AAACCTTAAA CAAACACTGA CGATGAGCAA TGACTCTTTA GAGGATGCAC AATACTCTGC TGCCCTACAT AGCTACTTTA CGGTCAGTAA TCCAGGCAAT GTGAGTATCG ATGCCTTAAC AGGAGTTCGT TATAGTGACA AACTCACGGG CAATTCAAGT ACTCAACAAG AGGCTGTAAG TTGTGTTGGT GAAATAGATC GTGAATATCA TAGCAGTGAA AAAATGACGG TTATTGATAA TCATTGGCAG CGTAAAATTG ACATAATAAG CAGTAATTGT CAGCAATGGG TATTGTGGAA TCCCGGTACG GAACTAGCAA ACACTATGGC AGATATTCAC CCTCAAGGTG AGCAAGAGTA TGTTTGTTTA GAAGCAGCAA ATACTAGCTG GCAAATAATA CCAGCGGGTG AAACGGTTGT TATTTCACAA GAAATAACTG TCACTAACTG TTAA
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Protein sequence | MTKIPLNNDF AQVTSITLNQ ESGEERFEGL NISHAYCQAK VSLYGGQVLS FKPSGHRDVL WLSEQASYQM GKAIRGGIPL CWPWFGANDK QSQYLTENPN TALKPVNHGF ARQLPWHITS INADESGVTL VLVLSGDKQH PLWPNAYTLT QTLFFGKNLK QTLTMSNDSL EDAQYSAALH SYFTVSNPGN VSIDALTGVR YSDKLTGNSS TQQEAVSCVG EIDREYHSSE KMTVIDNHWQ RKIDIISSNC QQWVLWNPGT ELANTMADIH PQGEQEYVCL EAANTSWQII PAGETVVISQ EITVTNC
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