Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3620 |
Symbol | purU |
ID | 3519679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3756783 |
End bp | 3757661 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286068 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_270288 |
Protein GI | 71278117 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGATA TCAAACCAGT ATCGCAAACC CACGTTATCA CCGCAAGCTG CCCTAGCCAG CCTGGAACGG TTGATGTTGT TACCCGTTTT TTGTTTGAAC AAGGCTTTTA TATTAATGAA ATTCATTCGT TCGATGATAC CGATCAAGAT CGTTTCTTCA TCCGTATAGA GTTTAGAGCC GATACAGCAA CAAACTTTAA TAGAGATGAC TTTTGCCAAC AGTTCGGTGA ACGGGCAAGT GAATTTGAAA TGAAATGGGA ACTGGCGTCG AGTCCTTATA AATCTAAAGT TGTGATCATG GTGTCGAAGC ACGATCATTG TCTTAATGAC TTATTATATC GTTATCGCAC TGGTGATCTT AATATTGAAA TTCCAGCAAT TATTTCTAAT CATCCTGATT TAGAAGATCT GGCCAAATGG CATGATATTC CTTATTACCA TCTACCTATC ACTAAAGAAA CTAAACCAGA ACAAGAAGCT AAAGTTTTTC AGATCATTCA AGATTCTGAA GCAGATTTAG TGGTATTAGC ACGTTACATG CAAGTACTCT CTAGTGATAT GTGTAAAAAA CTGTCCGGTA AAGCGATTAA TATTCACCAC TCGTTATTAC CTGGTTTTAA GGGCGCTAGA CCTTATTATC AAGCCTATGA TCGTGGTATT AAATTAGTCG GCGCTACTGC GCATTATGTC AGTGATGATC TTGATGAAGG TCCAATTATT AGCCAAGGTG TTGAAACTGT TGACCACAGT TATTACCCTC AAGATCTAGC CGCTAAAGGA CGTGATATAG AATGTTTAAC GCTAGCTCGC GCGGTACGCT GCCATATTGA GCATCGAATT TTCTTACACG GTAAAAAATC CGTCGTATTT GCTAAGTAA
|
Protein sequence | MSDIKPVSQT HVITASCPSQ PGTVDVVTRF LFEQGFYINE IHSFDDTDQD RFFIRIEFRA DTATNFNRDD FCQQFGERAS EFEMKWELAS SPYKSKVVIM VSKHDHCLND LLYRYRTGDL NIEIPAIISN HPDLEDLAKW HDIPYYHLPI TKETKPEQEA KVFQIIQDSE ADLVVLARYM QVLSSDMCKK LSGKAINIHH SLLPGFKGAR PYYQAYDRGI KLVGATAHYV SDDLDEGPII SQGVETVDHS YYPQDLAAKG RDIECLTLAR AVRCHIEHRI FLHGKKSVVF AK
|
| |