| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3613 |
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| Symbol | |
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| ID | 3519670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3748896 |
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| End bp | 3750419 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637286061 |
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| Product | putative fumarate hydratase, class I |
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| Protein accession | YP_270281 |
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| Protein GI | 71278147 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.985356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATCA TTAAACAACA AGACGTAATC GATAGTATTG AAGATGCATT GCAATATATT
TCTTATTATC ACCCGATTGA TTTTATTCAG GCACTAGAAA AAGCCTATAA CAAAGAAGAA
TCAACGGCGG CGAAAGACGC AATAGCACAA ATTTTAATTA ACTCACGTAT GTCAGCACAG
GGTAAACGCC CAATCTGTCA AGATACCGGT ATTGTTACCT GTTTTGTTAA AGTAGGTATG
GAAGTTCAGT GGGATAAAAC TGACATGACC GTACAGCAAA TGGTTGATGA AGGTACGCGT
CGTGCGTATT TAAATCCTGA TAATCCATTA CGCGCCTCAA TAGTTAAAGA CCCAGCAGGA
AAGCGTATAA ATACTAAAGA TAATACGCCG GCCGTTGTTC ATATCGACAT GGTTCCGGGC
GCTGGTCTTG AAATCATGAT TGCTGCTAAA GGCGGCGGTA GTGAAAACAA AACTAAAATG
GCGATGTTAA ACCCATCTGA CTCAATTGCT GATTGGGTTG TTAAAACTCT ACCTACAATG
GGCGCAGGTT GGTGTCCACC AGGAATGTTA GGTATAGGTA TTGGTGGTAC TGCTGAAAAA
GCAGGCGTAT TAGCGAAAGA AAGCTTAATG GACCCAGTAA ACATTCAAGA CTTAATTGAA
CGTGGTCCAC AAAATGCAGA AGAAGAATTA CGCCTTGAAA TTTTTGAACG TGTAAATAAA
TTAGGTATTG GCGCGCAAGG TTTAGGTGGT TTAACAACCG TAGTTGATGT GAAAATTAAC
TCAGTACCAA CGCATGCGGC TTCTAAACCT GTTGTTATGA TCCCGAATTG TGCCGCTACA
CGCCATGTAC ACTTCCACCT TGACGGTTCT GGTCCTGCTG ATTTAACGCC ACCTAAGCTT
GAAGAGTGGC CAGAAATCAC CTGGGAAGTT GGTGAAAATG TTCGTCGTGT CAATGTTGAT
GATTTAGGTA AAGCGGATAT TAGCGATTGG AAAACTGGTG AAACTGTTTT ACTTAGCGGT
ACCATCTTAA CGGGTCGTGA TGCTGCGCAT AAACGTATTC AAGATATGTT AGCTAAGGGC
GAAAAACTGC CGGTAGACTT TACTGACAAG TTTATTTATT ACGTAGGCCC TGTAGATGCC
ATTGGTGATG AAGCGGTTGG TCCTGCGGGC CCTACAACAG CAACACGTAT GGATAAATTT
ACTGAGATGA TGTTAGCTGA GACAGGTCTT TTAGGCACAA TCGGTAAAGC CGAACGTGGT
GCTCAAACTT GTGAAAGCAT TAAAAACCAT AAGTCTGTGT ACTTAATGGC TGTCGGTGGT
GCTGCTTACC TTGTATCAAA AGCAATCAAA AAAGCGAAAG TGGTTGCCTT TGAAGACATG
GGTATGGAAG CTATCTATGA ATTTGTAGTA GAAGACATGC CAGTCACTGT TGCTGTTGAT
AGCACCGGCG AATCTGCTCA TGTAACAGGC CCTGAAATTT GGAAAGTTAA AATCCAAGAA
GCTGAAGACA AAGCAAAGAC TTAA
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| Protein sequence | MAIIKQQDVI DSIEDALQYI SYYHPIDFIQ ALEKAYNKEE STAAKDAIAQ ILINSRMSAQ
GKRPICQDTG IVTCFVKVGM EVQWDKTDMT VQQMVDEGTR RAYLNPDNPL RASIVKDPAG
KRINTKDNTP AVVHIDMVPG AGLEIMIAAK GGGSENKTKM AMLNPSDSIA DWVVKTLPTM
GAGWCPPGML GIGIGGTAEK AGVLAKESLM DPVNIQDLIE RGPQNAEEEL RLEIFERVNK
LGIGAQGLGG LTTVVDVKIN SVPTHAASKP VVMIPNCAAT RHVHFHLDGS GPADLTPPKL
EEWPEITWEV GENVRRVNVD DLGKADISDW KTGETVLLSG TILTGRDAAH KRIQDMLAKG
EKLPVDFTDK FIYYVGPVDA IGDEAVGPAG PTTATRMDKF TEMMLAETGL LGTIGKAERG
AQTCESIKNH KSVYLMAVGG AAYLVSKAIK KAKVVAFEDM GMEAIYEFVV EDMPVTVAVD
STGESAHVTG PEIWKVKIQE AEDKAKT
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