Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3608 |
Symbol | |
ID | 3522221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3745015 |
End bp | 3745956 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286056 |
Product | sensor histidine kinase |
Protein accession | YP_270276 |
Protein GI | 71281749 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGC CAGACCCCTA TAGAGTTGCC TATGAGCGAG AGCGAAAAGC GAGATTACTT GCTGAGCACT TATTAGATAA CAAAACGCGT AGTCTTTATG ACAATTGTAT TAAGCTTGAG TCAACCGTAA AAGCACTTAA AACAACTCAG CAACAGCTCA TACAATCTGA AAAAATGGCC TCTATAGGTC AGCTTGCGGC AGGCGTTGCT CATGAAATAA ATAATCCTAT AGGTTATTCA ATCAGCAACT TATCTATGCT GTCTGAATAT GTCGATTCAT TTCTTCTGTT AGATGATTTC ATGATCTCTA ATTTACCTGC ATTAGCATCA CAAGATGTTG CTCAATCCTA TCAACAATTG AGGGAACAAG AAGACATTGA TTATATTAGA GGTGATGTAA AATCTATGAT GGCTGAAACA GGCAAAGGGC TGAATAGAGT TAAAGAAATC GTTAGTAATT TGAATAAAGT GAGTCACTCT GGCTCTTTTG AAAAAGAGCT TTGCGATATT AATATGCTCA TTGAAGAGTC TCTTAAAGTT GTATGGAATG AGTTGAAATA TTGCTTAACG GTAAATAAAC ACTTTACAGG ATTACCTAAA ATTTATTGTC ATCCAGGTGA AATTAACCAA GTGTTGTTGA ATATGTTTAT AAACGCGGCC CACGCAACAA AAGACAAAGG TGCTTTAGAT ATAACGACCG GAATTAAGCA GGAGAAGGGA AGGGAGTACC TGACTATTGA AATAAGCGAT CAAGGTGAAG GTATACCTCA GAAGGTAATT AATAAAATTT TCGACCCCTT TTTTACCACT AAACCAGTAG GTGTTGGCAC CGGATTAGGT TTATCAGTCT CTTTTGGGAT TATTGAAAAA CACAAAGGTA AAATAGAGGT GGCTAGTGAG GAAAATCAAG GCACTACCTT TACTATTTAC TTACCATATT AG
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Protein sequence | MNKPDPYRVA YERERKARLL AEHLLDNKTR SLYDNCIKLE STVKALKTTQ QQLIQSEKMA SIGQLAAGVA HEINNPIGYS ISNLSMLSEY VDSFLLLDDF MISNLPALAS QDVAQSYQQL REQEDIDYIR GDVKSMMAET GKGLNRVKEI VSNLNKVSHS GSFEKELCDI NMLIEESLKV VWNELKYCLT VNKHFTGLPK IYCHPGEINQ VLLNMFINAA HATKDKGALD ITTGIKQEKG REYLTIEISD QGEGIPQKVI NKIFDPFFTT KPVGVGTGLG LSVSFGIIEK HKGKIEVASE ENQGTTFTIY LPY
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