| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3594 |
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| Symbol | pcaF |
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| ID | 3522404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3731280 |
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| End bp | 3732509 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637286042 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_270262 |
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| Protein GI | 71281932 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.246477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACG TATATATCTG TGACGGCGTA CGCACGCCAA TTGGAAAATA TGCTGGTGCT
TTATCATCAG TGCGCGCCGA TGACCTAGCG GCTATTCCAC TTAAAGCATT AAAAGACAGA
AACCCAACAT TAGACTTAAC CCAAGTAGAC GATGTTATTT TGGGCTGTGC CAACCAGGCA
GGTGAAGACA ATCGCAACGT CTCTCGTATG GCACTTTTAT TAGCAGGCTA TCCAACTCAA
GTCGCTGGTT GCACCATTAA CCGTTTATGT GGCTCAGGTA TGAATGCTAT TGCGATGGCA
ACAAATGCGA TTAAAGCTGG CGAGGCGGAT ATGTTAATTG CAGGCGGTGT CGAAAGCATG
TCGCGCGCAC CTATGGTAAT GGCTAAAGCT GAAGCGGCTT TTTCACGCAG TGCTGAATTA
TTCGATACAA CATTAGGCTG GCGCTTTGTT AATCAAAAAC TGCACACCGC CTATGGCACA
GACTCTATGC CTGAAACGGC AGAAAATGTG GCTGAGCAAT TTAACATTAG TCGTGAAGCT
CAAGACAAAT TCGCTTTTGC TAGTCAAAGT AAAGCAAAAG CCGCACAAGA AGACGGCCGA
TTTGCCGAAG AAATAGTCCC TGTGGTTATT GCAAAACGTC GCGGTGATGA TGTCATTGTT
GAAAAAGATG AACATTTACG TCTTAGCCCG TTAGATAAAC TAGCAAGCCT CAAAGCCCCC
TTTCGAGAAG GAGGCTCAGT CACTGCAGGT AATACTTCTG GCGTAAATGA TGGTGCTGCA
GCGGTTATTC TCGCGAGTAA AGAAGCGGCT TTAGCAAATG GCTTAACACC AAAAGCGAGA
ATACTTGGCT CTGCTGTTAT TGGTGTTACT CCTGAAATTA TGGGTATTGG CCCCGCGCCA
GCGAGTGCCA AACTATTAAA ACGTTTAGGC CTTAGTATTG ATGATATGGA CATTATTGAG
TTCAACGAAG CTTTTGCTGC ACAGGCACTT GCCAGTGCGC GTGAATTGGG TCTTAAAGAT
GATGATGCAC GTTTAAACCC ACAAGGCGGC GCCATTGCGC TGGGTCATCC ATTAGGCATG
AGTGGCACAC GTTTATTAAT TACGGCAACG AAGCAGCTTG AGCGCAGTGG TAAACGTTAT
GCTCTCTGCG CTATGTGTGT TGGTGTTGGC CAAGGCATTG CGATGGTCAT TGAGCGATAT
AGTGAAAAAT ACAGTGAGAA TACACAGTAA
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| Protein sequence | MKDVYICDGV RTPIGKYAGA LSSVRADDLA AIPLKALKDR NPTLDLTQVD DVILGCANQA
GEDNRNVSRM ALLLAGYPTQ VAGCTINRLC GSGMNAIAMA TNAIKAGEAD MLIAGGVESM
SRAPMVMAKA EAAFSRSAEL FDTTLGWRFV NQKLHTAYGT DSMPETAENV AEQFNISREA
QDKFAFASQS KAKAAQEDGR FAEEIVPVVI AKRRGDDVIV EKDEHLRLSP LDKLASLKAP
FREGGSVTAG NTSGVNDGAA AVILASKEAA LANGLTPKAR ILGSAVIGVT PEIMGIGPAP
ASAKLLKRLG LSIDDMDIIE FNEAFAAQAL ASARELGLKD DDARLNPQGG AIALGHPLGM
SGTRLLITAT KQLERSGKRY ALCAMCVGVG QGIAMVIERY SEKYSENTQ
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