| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3577 |
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| Symbol | |
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| ID | 3519734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3714856 |
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| End bp | 3715824 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286025 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_270245 |
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| Protein GI | 71278056 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.635523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTTAG AAAAATCACA ATTAAATGAA TTACATTGGC TAATGGAAAT GTTGCATAAC
ATTGATGTTG GTCTAGTTGT GCTTGATAAA GAGTTCACCA TTCAAATATT TAATGGTTTT
ATGGAAAACC ATAGTGGTTT ATTACCTCGT CAAGTAAAGG GAAAGTTGAT ATTTGATCTC
TTTGAAGAAA TCCCTAAAGA TTGGTTTACT CGCAAGGCAG AATCAGTTTT TTTACTGAAA
AATAAAGCCT TTACCATATG GGAACAAAGA CCCTACTTGT TTAAGTTTGA TAGTTATCGC
CCTGTTACTG GCAGCGCTGA TTTCATGTAT CAAAACACCA CGTTCATTCC GCTTTTATCT
TCTACGGGTG ACGTTAGCCA CTTGTGTTTA TTGGTTTATG ATGTCACAGA CAATGCTGTG
CATAAGCAAG GCTTGAAAAA AGCGAATGAA GAATTGGCAA TATTAAGTCA AACAGATGGC
TTAACTCAAT TGTTCAATCG TGCGCACTGG GAGACGTGTT TATTAGCTGA ACATAAGCGT
TGGGGCCGAA GTCAACATGC TAGCTCATTA GTGATGTTAG ATATTGATCA CTTTAAAAAT
GTAAATGATA CTTATGGTCA CGTGGTTGGT GATGTCGTTA TTCGCCACCT TTCTAGCTTG
ATTCGCCACC ATGTTAGGGA AACCGATATT TGTGGTCGTT ATGGCGGTGA AGAGTTTGCC
ATTTTATTGG CAGATACCTC CCTTAAAAAT GCCTACGTAT TTGCTGAACG TCTTCGAAAA
GAAGTGGCTA AGGCCACTGT GACTTACAAT GATATTGATA TTAATTACAC TATAAGTGTT
GGTGTAGCTG AAGTTGATGA GAGTATTACA AGCCATGAAG CTTGGGTTGA ATGTGCTGAT
GCCGCTTTAT ATCAATCAAA AGAAACAGGT CGTAACAAAA CGTCATTGCA TCCGAAACAA
AACAGATAG
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| Protein sequence | MTLEKSQLNE LHWLMEMLHN IDVGLVVLDK EFTIQIFNGF MENHSGLLPR QVKGKLIFDL
FEEIPKDWFT RKAESVFLLK NKAFTIWEQR PYLFKFDSYR PVTGSADFMY QNTTFIPLLS
STGDVSHLCL LVYDVTDNAV HKQGLKKANE ELAILSQTDG LTQLFNRAHW ETCLLAEHKR
WGRSQHASSL VMLDIDHFKN VNDTYGHVVG DVVIRHLSSL IRHHVRETDI CGRYGGEEFA
ILLADTSLKN AYVFAERLRK EVAKATVTYN DIDINYTISV GVAEVDESIT SHEAWVECAD
AALYQSKETG RNKTSLHPKQ NR
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