Gene CPS_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3577 
Symbol 
ID3519734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3714856 
End bp3715824 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content38% 
IMG OID637286025 
ProductGGDEF domain-containing protein 
Protein accessionYP_270245 
Protein GI71278056 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.635523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAG AAAAATCACA ATTAAATGAA TTACATTGGC TAATGGAAAT GTTGCATAAC 
ATTGATGTTG GTCTAGTTGT GCTTGATAAA GAGTTCACCA TTCAAATATT TAATGGTTTT
ATGGAAAACC ATAGTGGTTT ATTACCTCGT CAAGTAAAGG GAAAGTTGAT ATTTGATCTC
TTTGAAGAAA TCCCTAAAGA TTGGTTTACT CGCAAGGCAG AATCAGTTTT TTTACTGAAA
AATAAAGCCT TTACCATATG GGAACAAAGA CCCTACTTGT TTAAGTTTGA TAGTTATCGC
CCTGTTACTG GCAGCGCTGA TTTCATGTAT CAAAACACCA CGTTCATTCC GCTTTTATCT
TCTACGGGTG ACGTTAGCCA CTTGTGTTTA TTGGTTTATG ATGTCACAGA CAATGCTGTG
CATAAGCAAG GCTTGAAAAA AGCGAATGAA GAATTGGCAA TATTAAGTCA AACAGATGGC
TTAACTCAAT TGTTCAATCG TGCGCACTGG GAGACGTGTT TATTAGCTGA ACATAAGCGT
TGGGGCCGAA GTCAACATGC TAGCTCATTA GTGATGTTAG ATATTGATCA CTTTAAAAAT
GTAAATGATA CTTATGGTCA CGTGGTTGGT GATGTCGTTA TTCGCCACCT TTCTAGCTTG
ATTCGCCACC ATGTTAGGGA AACCGATATT TGTGGTCGTT ATGGCGGTGA AGAGTTTGCC
ATTTTATTGG CAGATACCTC CCTTAAAAAT GCCTACGTAT TTGCTGAACG TCTTCGAAAA
GAAGTGGCTA AGGCCACTGT GACTTACAAT GATATTGATA TTAATTACAC TATAAGTGTT
GGTGTAGCTG AAGTTGATGA GAGTATTACA AGCCATGAAG CTTGGGTTGA ATGTGCTGAT
GCCGCTTTAT ATCAATCAAA AGAAACAGGT CGTAACAAAA CGTCATTGCA TCCGAAACAA
AACAGATAG
 
Protein sequence
MTLEKSQLNE LHWLMEMLHN IDVGLVVLDK EFTIQIFNGF MENHSGLLPR QVKGKLIFDL 
FEEIPKDWFT RKAESVFLLK NKAFTIWEQR PYLFKFDSYR PVTGSADFMY QNTTFIPLLS
STGDVSHLCL LVYDVTDNAV HKQGLKKANE ELAILSQTDG LTQLFNRAHW ETCLLAEHKR
WGRSQHASSL VMLDIDHFKN VNDTYGHVVG DVVIRHLSSL IRHHVRETDI CGRYGGEEFA
ILLADTSLKN AYVFAERLRK EVAKATVTYN DIDINYTISV GVAEVDESIT SHEAWVECAD
AALYQSKETG RNKTSLHPKQ NR