Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3558 |
Symbol | |
ID | 3520397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3696640 |
End bp | 3697275 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637286006 |
Product | 50S ribosomal protein L25/general stress protein Ctc |
Protein accession | YP_270232 |
Protein GI | 71279934 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.989428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT TATTAACATT AGAAGCTGAA GTACGTACTG ATTTAGGGAA AGGTGCGAGC CGCCGCCTAC GTCACGCGAA CAAAGTTCCT GCTATCCTTT ACGGTGAAAA TGAAGAACCT ATTTCTTTAA CTTTAGAGCA CAAAAACGTT TTCCGTGCTC AACAAGAAGA AGCGTTCTAC TCGCAAGTAT TAACATTGAA CATCGCTGGC AAGCCAGTTG AATGTCTAAT TAAAGACATG CAACGTCATC CGTTCAAGCA AGTTGTAATG CACTTAGATT TCTTACGCAT TGATGCAAAG CATGCTGTTC ATGCAAACGC TCCTATTCAC TTCTTAAACG AAGATGAAGC GGCTAAAACT GGTGCGAACA TTTCTCACCA CATGAATGAA ATCGCTATCA CTTGTTTACC AAAAGACTTA CCTGAGTTCA TCTCAATTGA CTTAGCTGGT TTAGAACTTG GTCAAACTAT CCATTTATCA GACGTTACCT TCCCTGCAGG CGTTACTTCT GATGAATTGG CTAAAGGCGA AGATCACGAT CTAGCTGTTG TTTCTGCTAA TGCACCGAAA GCTGCAAAAG TAAGCACTGA CGATGAAGCT GCTGCTCCAG CAGAAGAAGC TCCAGCTGCT GAATAA
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Protein sequence | MTDLLTLEAE VRTDLGKGAS RRLRHANKVP AILYGENEEP ISLTLEHKNV FRAQQEEAFY SQVLTLNIAG KPVECLIKDM QRHPFKQVVM HLDFLRIDAK HAVHANAPIH FLNEDEAAKT GANISHHMNE IAITCLPKDL PEFISIDLAG LELGQTIHLS DVTFPAGVTS DELAKGEDHD LAVVSANAPK AAKVSTDDEA AAPAEEAPAA E
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