Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3549 |
Symbol | |
ID | 3519424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3688255 |
End bp | 3689076 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285997 |
Product | hypothetical protein |
Protein accession | YP_270223 |
Protein GI | 71279066 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGAAT TGTTTTTATC AGAATTAAAG TCTGCCGATA AAGATTTACT ACAGAAACTT GTACTAATTG AAGAGCATGT TTTTGCCGAT AGTGCTCAAG AACCTGTGCA AACTGAAGCA TCTTTGGATA GCTTAGAATT AATTATCAGC CAGTGTATTG CCATCATAAG TGAAATAGAA TCACCATTAG AAAAAGCAGA AGCTTTACTT AATGAATTAT ATTTTCAGCA CTTATTTATA GACCGTTATC AGACCCGCTG GCCTATTTCT GCTTATAGTG TCGCAAAAGG TCTGAATCAA CGTGCTATGT CACCTGTTGT TAAGGCGGCT TTAGTTAAAG AAATCATTAC CGCTTGTGGC TTTGAGACAG ACTTAGTATT TATCCCCAAT AAAATTATGG TACGCCTGTG CTGTGATGAG CAGTACGCTA TTATTTTTGA TGCAATAACA GGAGAGTCAC TCGATTGGAC TGAGCTTGAT GTGCGTTTAG ATGAGTTAGA TGGCGATCCT GGAGAGCAAG AATTAAAAGC AATCGATGAC AGTGTCGCTT TGGTAGAACA CCTATCAGCA CTGAAAAACG TTTTGATCCA TGAACAGGCC TTTGATAAAG CATTAACATG CGTTGATGTT ATCTTGTCAT TAAATCCTGA CGATCCATTG CAACGTAGAG ACCGTGGTTT CTTGCTGCAC CAGCTTGATT GTTTTAAAGT GGCGGTTGAT GATTACCGTT ATTTCGTAGA GCAATGCCCT AAAGATCCCG CAGCGAAAAT ATTAAAAATT CAACTTGAAA AAATTGATGT TGGTAATAAC GTACTTCACT AG
|
Protein sequence | MNELFLSELK SADKDLLQKL VLIEEHVFAD SAQEPVQTEA SLDSLELIIS QCIAIISEIE SPLEKAEALL NELYFQHLFI DRYQTRWPIS AYSVAKGLNQ RAMSPVVKAA LVKEIITACG FETDLVFIPN KIMVRLCCDE QYAIIFDAIT GESLDWTELD VRLDELDGDP GEQELKAIDD SVALVEHLSA LKNVLIHEQA FDKALTCVDV ILSLNPDDPL QRRDRGFLLH QLDCFKVAVD DYRYFVEQCP KDPAAKILKI QLEKIDVGNN VLH
|
| |