Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3543 |
Symbol | |
ID | 3520580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3683367 |
End bp | 3684077 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285991 |
Product | hypothetical protein |
Protein accession | YP_270217 |
Protein GI | 71280117 |
COG category | [R] General function prediction only |
COG ID | [COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.074661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACC AAGATACAAT TGCTAGCGAA GATGGTAGCG ATATCAATAT ATTGTTGAAC ACTGTCCAAA ATGCTAAAGC ACTCGTTATA TTTGCCCATG GCGCGGGCGC TAATATGTCA CATGAGTTCA TGAATGAAAC ATCGCGGTTA CTTAATCACT TGGGCATCAA TGTTTTACGT TTTAATTTCC CTTTTATGGA TAAAAGGGCA CTGACAGGTA AAAAATACCC CCCTGATAGA ATGCCTAAGC TGTTGCTTTG TTATGAAACC GTGATCGAAT ACGTAGTTGA TAAAAAACTA AGTCATCAGT TACCTTTATT TATTGGTGGT AAGTCTATGG GCTCGCGTGT TGCGGCAAGC TTGGTGGCTG ATTCTGATCT ATTAAAGAGT CGTTTACTTA ATCACATTTC TGGCGTTTTT TGTATAGGTT ATCCATTTCA TCCAGCGAAA AAACCTGAAA AACTACGTCT TGAACCTTTG GTTGATGCCA ATAAGCCAGT ATTAATTGTA CAAGGTGACC GTGATACTTT GGGTAATAAA GTTGAGATTG CCAGTTATCG GCTAGCTGAG CACTGCCAAT GTGTTTTTTT AGAAGATGGC GATCACAGTT TAAAACCAAG AGTTAAATCA GGTTTTACTC ATCAGGCACA CATGCAAAGT GCTGTTGAAG AAATTGTGAC ATTTATTGAA CGGGTAACTA TTAGCAGTTA A
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Protein sequence | MTHQDTIASE DGSDINILLN TVQNAKALVI FAHGAGANMS HEFMNETSRL LNHLGINVLR FNFPFMDKRA LTGKKYPPDR MPKLLLCYET VIEYVVDKKL SHQLPLFIGG KSMGSRVAAS LVADSDLLKS RLLNHISGVF CIGYPFHPAK KPEKLRLEPL VDANKPVLIV QGDRDTLGNK VEIASYRLAE HCQCVFLEDG DHSLKPRVKS GFTHQAHMQS AVEEIVTFIE RVTISS
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