| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3534 |
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| Symbol | |
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| ID | 3520144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3673855 |
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| End bp | 3675687 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637285982 |
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| Product | M61 family peptidase |
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| Protein accession | YP_270208 |
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| Protein GI | 71279684 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT TTACGCGCGT ATTTAATTAT AAAATTAAAT TAATAATAGC AATATCTTTA
TTTTTTACAC AGCTGATATC AGCTAATGCG AGTGTAGAAG TTAACATCAG CGTAGAGCAA
CCAGAGCACC ATTTAGCGAA CGTTGAACTT AAATTTGAGC AAGTAAATGA AAGTAAAGTT
AACTTTTATC TTCCTACTTG GCGTACCGGT CGATACGAGA CGCTCAACTT AGCCAATGGA
ATTCGTGAAT TCATTGCTCA AGATAGCCAA GGTAATGTGC TTAGCTGGCA TAAAATAGAT
AAAAATACGT GGCAGGTGAG TGATGCTAAA AACAAAAAAA TCACTTTAAC TTACCAAGTT
TATGCAAACC AATTGGCGAA AAGAACTCGT CATATTGATG ATAGCCATGC TTTTTTAGAT
AGCTCCGCCG TTGTTATGTA CAGTCAGGCA AGTCGAAGTT CAGAACATAT CGTACAGCTT
TCAGTGCCTA AATTATGGAA AAGCTTTTCT GGTCTTGAAT CCGGTAATAA TAGCCATCAA
TTTATTGCCC ATGATTATGA TCAACTAGTA GATTCTCCTA TTGAAAGCGG TATTAATGAA
CACTATCAGT TTAGCGTTGA TAATCGACAG TATGAACTGG TCATATGGGG AGAAGGTAAT
TACGACAGTG CGAAAATGGT TAAAGATTTA CAAATATTGG TAAAACAAAG TAAGCATGTT
TGGCAGGGAT ACCCTTTTAA GCGTTATGTA TTTATGGTGC ACGCAACGAG TGGTGCTCGC
GGTGCAACAG AGCATGTAAA TTCAACCATA ATTCAGCGTT CGCGTTTTAA ATTTTCAACC
CGAAAAGATT ACCTCAGTTT TATTGCTGTT GCTGCTCACG AATTTGTTCA TACATGGAAT
GTAAAGCAGT ATCGCCCGAA AGGCATTGTG CCTTACGATT ATCAACAAGA AAATTACTCT
AACTTGTTAT GGTTAGTAGA AGGTTCAACC AGTTATTTGC AATACCAGCT TTTATTACGT
GGTAATTTAA TGACGACAGA TGAATTTTTT ACTGCGTTAG CTAAACGAAT TACCGCGCAT
GCTCATAAAC CAGGGAAAGA AAGTCAGAGT GTGGCACAAG CAAGCTTTGA TGCTTGGATA
AGTGAGGGAG GAGATTATGG TAATAATCAT AGCGTGAACA TTTATTCAGA AGGATTTTTA
GCCTCTTGGT TACTTGATTT TGATATTCTC GCTAAAACTG CATTATCGAA AAGTTATCGA
AATGCACACA ATCAACTTTA CCAACAACAT CGCCTGCCAA AAGGCTATGA TGAACAAGAT
GTTTTAAGTA TATTAGAACA GATAACAGGT GACGACTATC AAGTTTGGTG GCAAAAAAAT
ATCCAAGGAA CAACAAAAAT TAATTTTAAC CGTTTATTAG CTAAAGCTGG TCTAAAGATG
AGTTATGCTA AAAATGTTAA GGATAAATCG AGTGAGCAAT CTAAAGTTTG GACTGGTCTT
AAAACTAAGC TAGATAACCA TGATTTAATT GTTTCATCGG TAGAGAAAAA TAGTCCAGCA
TGGGACGCAG GACTTACGAC AGAAGATGTC ATTGTTGCAA TCGATGGACT GCGCCTGCTC
GACAATGAAC TTGATAACCG TTTAAAAGAT TTTAAACCGA AACAAACTAT TACGGTTACC
TATTTTCGAA GAGATAAGTT AATAACTAGC CGTCTTAAAC TGGCAGCGAT ACCTAAAAAT
AAGTTAAAAA TCATTCCAAT TGCAAAGGCA AGTGTCGAAC AAAAAGCATT TTTTAAAGCA
TGGATGGGTG TCGATTTTCC AGAGAAGAAA TAG
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| Protein sequence | MSEFTRVFNY KIKLIIAISL FFTQLISANA SVEVNISVEQ PEHHLANVEL KFEQVNESKV
NFYLPTWRTG RYETLNLANG IREFIAQDSQ GNVLSWHKID KNTWQVSDAK NKKITLTYQV
YANQLAKRTR HIDDSHAFLD SSAVVMYSQA SRSSEHIVQL SVPKLWKSFS GLESGNNSHQ
FIAHDYDQLV DSPIESGINE HYQFSVDNRQ YELVIWGEGN YDSAKMVKDL QILVKQSKHV
WQGYPFKRYV FMVHATSGAR GATEHVNSTI IQRSRFKFST RKDYLSFIAV AAHEFVHTWN
VKQYRPKGIV PYDYQQENYS NLLWLVEGST SYLQYQLLLR GNLMTTDEFF TALAKRITAH
AHKPGKESQS VAQASFDAWI SEGGDYGNNH SVNIYSEGFL ASWLLDFDIL AKTALSKSYR
NAHNQLYQQH RLPKGYDEQD VLSILEQITG DDYQVWWQKN IQGTTKINFN RLLAKAGLKM
SYAKNVKDKS SEQSKVWTGL KTKLDNHDLI VSSVEKNSPA WDAGLTTEDV IVAIDGLRLL
DNELDNRLKD FKPKQTITVT YFRRDKLITS RLKLAAIPKN KLKIIPIAKA SVEQKAFFKA
WMGVDFPEKK
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