| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3516 |
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| Symbol | |
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| ID | 3522716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3654927 |
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| End bp | 3655970 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637285964 |
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| Product | putative transglycosylase |
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| Protein accession | YP_270190 |
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| Protein GI | 71282243 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.112608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGA CTATAAAAAG CATCATTCTA TCGATGCTTC TAATTATTGG CATGATGAAC
TCATCAATGG CTGCTAAAGC GGAGCTTACA GAAGAGGGGT TTGCTGAGTA TGTTATAAAA
CTAAAGGCAG AAGCATTAGC GAAAGGGTTT AGCAAAGCAT TAATTGATGA AAGTTTTGCA
GAAGTAAAGT TTCACGAACG TGCGGTAAAA GCGGATAGAA GCCAACCTGA AAATGTTGAA
ACACTTGATA CTTATCTACC TAAGCGAGTG CCAAAGTGGA AAGTTGATAA AGCCAGGGCT
TTGTATAAAG AGCATCAAGT ATTGTTAAAC CAGATCGGTG AAAAGTATCA GGTTCAACCG
CGTTTTATTG TAGCTTTGTG GGGACTTGAA ACTAATTTTG GTAAGTTCAC TGGTGGATAT
AATGTTATTT CTGCCCTAGC GACATTGGCT TATGAAGGGC GACGAGAAGT CTTCTTCAAA
AAACAATTAA TGGCAGCATT AACTATATTA GATGAAGGTC ATATTACTAA TAAAAATATG
AAGGGCTCAT GGGCAGGGGC AATGGGACAA AATCAATTTA TGCCAACGTC TTTTTTAAGC
TACGCAGTTG ATGGTGATGG TGATGGTAAG AAGGATATTT GGCAAAACCA AGCCGATATT
TTTTCGTCTA TGGCAAATTA CTTACAAAAA GAAGGCTGGA ATGATGAACT GACTTGGGGA
CGCCAAGTGA AGTTACCAAA AAACTTTGAC TATACTTTAG CTATCCCAAA GAATACTGGC
AGTCGAAAAA ATTGGTTAAA GGCGTGGTCC AAAACTGAAA GAACGCTTAC TCAGTGGCAA
GCACTAGGCG TAAGGCGTTC TGATGGTACT AATTTACCTA ATGTTGATAT TAAAGCGGCG
TTAGTTTTTC CAGATGATGA AAATGGCCGA GCATACCTTG CTTATGATAA TTATAAGAGT
TTAATGCACT GGAATTTATC TTATTATTTT GTCAGTTCAG TAGGTCATTT ATCCGATCGT
ATTAAGTTTC CACCTATTCA GTAA
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| Protein sequence | MNLTIKSIIL SMLLIIGMMN SSMAAKAELT EEGFAEYVIK LKAEALAKGF SKALIDESFA
EVKFHERAVK ADRSQPENVE TLDTYLPKRV PKWKVDKARA LYKEHQVLLN QIGEKYQVQP
RFIVALWGLE TNFGKFTGGY NVISALATLA YEGRREVFFK KQLMAALTIL DEGHITNKNM
KGSWAGAMGQ NQFMPTSFLS YAVDGDGDGK KDIWQNQADI FSSMANYLQK EGWNDELTWG
RQVKLPKNFD YTLAIPKNTG SRKNWLKAWS KTERTLTQWQ ALGVRRSDGT NLPNVDIKAA
LVFPDDENGR AYLAYDNYKS LMHWNLSYYF VSSVGHLSDR IKFPPIQ
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