Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3514 |
Symbol | |
ID | 3522245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3653422 |
End bp | 3654318 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285962 |
Product | membrane protein |
Protein accession | YP_270188 |
Protein GI | 71281773 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAA GTACTCCCCA CCCGTCCTCT ATAATAAAAG CTGAACAGCA AAGCTTGCTT TACTTACATA TCGCAGTTTT CCTTTTCGGC GGCACTGCGC TATTTTCTAA ACTCATTGGT TTACCTGCCC TGGATATAAC CGTTTATCGA ACGGGTATTG CTGCCTTAGC ATTGTTTATT TTGCTAACGT TGCAAAAAAA ACAAATATCC TTATCAAGTA TGAAAGATTA CGGTATCGCC ATTTTATTAG GCTGTGTGGT AGGCTTACAT TGGGTCACTT ATTTTACCGG CATGCAAATG GCAGGGGTTA CTGTCGGCAT GATAGCTTTT TTTACTTACC CGGTAATAAC CGTCTTTATT GAGCCTTTTT TTAATAGAAC AGTCCCTAAA ATGAAAGATA TGATCACAGC TTTTGTGGTT ATTATTGGCA TTGTGCTGTT AATTCCTGAA ATTAGTTTTG GTAATCAAAT TACTTTAGGC ATTGTAACCG GAATTATTTC TGCGGTATTT TTTGCATTAC GAAATATTCT GCATAAAAAT TATTTTTCTC ATTATTCTGG GCCACATACC ATGCTATATC AAACCTTGGT AGCCTGTTTG ATGCTGTGCC TTTTTGTAGA GGTGCCACCA ATGCAAGTAA CAGAAAGCGA TTGGTTATTG CTTTTATTAG TCGGAGTTGT TTTTACTGCC ACTCCGCACG CCTTATTTGC CTCAAGTTTA CGTTCTTTAT CAGCCACAAC AGCTGGGCTC ATTTCTTGTT TACAGCCTTT GTACGGTAGT ATATTAGCCA TCATTCTATT ACATGAACGT CCTGATATCT TAACTATAAT CGGGGGGCTA TTGGTCGTTA GTGCTGCTAT TTTTGAAACA TGGTCAGTGA GTAGAGGAAG ACGTTAG
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Protein sequence | MTKSTPHPSS IIKAEQQSLL YLHIAVFLFG GTALFSKLIG LPALDITVYR TGIAALALFI LLTLQKKQIS LSSMKDYGIA ILLGCVVGLH WVTYFTGMQM AGVTVGMIAF FTYPVITVFI EPFFNRTVPK MKDMITAFVV IIGIVLLIPE ISFGNQITLG IVTGIISAVF FALRNILHKN YFSHYSGPHT MLYQTLVACL MLCLFVEVPP MQVTESDWLL LLLVGVVFTA TPHALFASSL RSLSATTAGL ISCLQPLYGS ILAIILLHER PDILTIIGGL LVVSAAIFET WSVSRGRR
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