| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3508 |
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| Symbol | |
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| ID | 3522453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3644473 |
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| End bp | 3646611 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637285956 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_270182 |
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| Protein GI | 71281981 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.189289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTTATC TCGAATTTAA TCACATTACG ATAGATACTC AGAATCAATT ACTGATCCGT
GATGGTGAAA GCATTATCCT TGCACCTAAA GTTTATGACT TATTGATCTT CTTTTGTAAA
AACCCAGCAA GAATAATAAC CAAAGATGAG TTAATGGATG AAGTCTGGAC AGGTACGTTA
GTGACTGAAA ATGCCATTAG TCGTACCCTA GTAAAAGTAA GAAAAGCATT AGGAGATGAT
CCTAAAAGCC CGCAATTTAT CATTACCGTG CCGCGTAAAG GCTATAGAAT GGTTACTGAA
TTTAATGGCA GTGATAAATG CCAATACAAT GAGCAAAATA CGACTGAGCA AACAAGTACA
AACAAAGAAA ACAATAATAC GATAACAACT TCTTTCTCTT CAGTTAATAG CACTAAAAAC
AAAAAACCAA AAACGTTATT TTCCTTGTTT GCGATCTCTT GCACATTATT AATAGTGGCA
GTTTCCTTTT ATTTTTCAAT TCAACAGAAT ATCGAAATAA TTGCCACTAA GCAGCTAAAG
CCACTAACGA GAGAGATAGC TGACGAACAA CATCCAAATG TCTCTCCAGA TTTAAGTCAA
CTTGCCTATA CCAAAGTAGT CAGGGGTAAA CCAAGTTATA TTAATATTGA AAACTTGTCA
GATCATTCCA AAATGAGTGT CAGTCACCCA AGAGGAAAGT TATCTCGCCC AGTATGGTCG
CCAACAGAGA GTAAAATTGC CTTTTTATAT CAGCATAAAC AGGTTTGTAT TATTTTTTTA
GCTGAACAAA AAGAAATTAA AAACAAAGAT AACTGGCAAG AAATTACAGA ATGTAGCGGC
GAAAGTTGGC CTCATTTGGT TTTTTCACCT GATGGCCAGT ATTTATACTT TAACGACCGA
CAATCAAAAG CTAATGGTTA TCAAATTTTT CGTGTCGATT TGCTTAATAA ACAAAAAGAT
ATTATTAATC AGCCAATCAC CAGTGGTCAG GGAAATTACG CTTTTGATAT TTCCCCTGAT
GGTCAACGCT TAGTCATGCT AAATAGTGAG TTCACTTCTC AAACTCGTAT TTATACACTA
GATATCGCCC AAGCTAAATT GCAACTAAGA GCAAAGTTAC CTTACTTGAT GGGCGCTGTC
GTTTGGCATC ATGACAATAT GACACTGGTG CATCCTTCTC CTCACCCAGC TTATGAGTTA
TGGCAAAGTA ATTTGGCCGG AGAAAAATTA GCAGTGGTTG TCAGTAATAC CTCACGGGTC
AAACAACTTT CGCGTATTAA CAACAAGCAA GATTTTACGT TTGTTTCTTA TTTAATAAAC
CGAGACATTC ACTTTAAAGA CTCAAATAAA GACAATCAGT CGATGAATTT AGATAACTCT
TCGGTAATGG ATTATCTGCC TGCGCTTGCT AATAATAGTG GTCAATATGC TTTTGTTTCC
AAACGTTCAA CTACAGCAGA AGTTTATTTA GCACCATTAC CTACTGAGAA TAAGCGTGTC
GCTACGAGTA AACAGCTAAC ATTTTTTAAT GCCCCGATGA GACTCTATCA ATTGTTATTT
TCACCTGATG ACAGTCAACT TATGGTTTTA GCTGACAATC AAATCGTTAT TGTTGATATA
GATAAAGGCG AGGTAAATAA ACTGGCTTTA GGTAATAGAG CTATTAGCGG TATCAGTTGG
CAGGATCAAC ACACCTTATT ATTCTCGACT ATTCGCAATA ATGATTGGCA ATTAATGCAG
TACAACATCG CAACTAAAAT ACTCACAGCC ATGCCAAATG GTTATCAGGG AGGTCTATAT
GATCACAAAA ATCAGAACTT TTACTTTTTA GCCGATGAAA GCAATGAAGT GATGAAATTG
AATGATTTAA CACAAACCCC TCAATCAACA GGATTAATTT GTGACCCAGG CTTTATAAAC
CGCCAGCTGA ATTTAACATT AACACCTAAT GGCTTAGTTT GTTTATCTGA TGTTAACAAT
AATATACAAG AACTTAAGTA CTATTCGTTT GCTGATAAGT CGATCTCCCC ATGGCAAAAA
TTGCCAACAT CGTTTGATTA TCAAATAAAT GATAAAGGTG TTATTTTCAC TCAGTTGAAA
CAATCTGTGG CTGATATTAT GCAAACAAAA AGTAATTAA
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| Protein sequence | MRYLEFNHIT IDTQNQLLIR DGESIILAPK VYDLLIFFCK NPARIITKDE LMDEVWTGTL
VTENAISRTL VKVRKALGDD PKSPQFIITV PRKGYRMVTE FNGSDKCQYN EQNTTEQTST
NKENNNTITT SFSSVNSTKN KKPKTLFSLF AISCTLLIVA VSFYFSIQQN IEIIATKQLK
PLTREIADEQ HPNVSPDLSQ LAYTKVVRGK PSYINIENLS DHSKMSVSHP RGKLSRPVWS
PTESKIAFLY QHKQVCIIFL AEQKEIKNKD NWQEITECSG ESWPHLVFSP DGQYLYFNDR
QSKANGYQIF RVDLLNKQKD IINQPITSGQ GNYAFDISPD GQRLVMLNSE FTSQTRIYTL
DIAQAKLQLR AKLPYLMGAV VWHHDNMTLV HPSPHPAYEL WQSNLAGEKL AVVVSNTSRV
KQLSRINNKQ DFTFVSYLIN RDIHFKDSNK DNQSMNLDNS SVMDYLPALA NNSGQYAFVS
KRSTTAEVYL APLPTENKRV ATSKQLTFFN APMRLYQLLF SPDDSQLMVL ADNQIVIVDI
DKGEVNKLAL GNRAISGISW QDQHTLLFST IRNNDWQLMQ YNIATKILTA MPNGYQGGLY
DHKNQNFYFL ADESNEVMKL NDLTQTPQST GLICDPGFIN RQLNLTLTPN GLVCLSDVNN
NIQELKYYSF ADKSISPWQK LPTSFDYQIN DKGVIFTQLK QSVADIMQTK SN
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