Gene CPS_3476 details

Gene Information

• Locus tag: CPS_3476
• Symbol: sodB
• ID: 3521651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3613981
• End bp: 3614565
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637285924
• Product: superoxide dismutase
• Protein accession: YP_270150
• Protein GI: 71281180
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0605] Superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCATTG AATTACCAGC ATTACCTTAC GAGCAAAACG CATTAGAACC GCACATTTCA 
GCAGAAACGT TATCATTCCA TTACGGAAAG CATCACAACA CTTATGTAGT TAAGCTTAAT 
GGCTTAATTG GCGGAACTGA ATTTGAAAAT AAAAGCTTAG AAGAGATTGT TAAAACGTCT 
TCAGCTGGAA TTTTTAATAA TGCAGCACAA ATATGGAATC ATACTTTTTA TTGGAATAGC 
TTAAGTCCAA ACGCTGGTGG TGAACCATCA GGTGATTTAT TAGCTGCAAT CAATAGTAAC 
TTTGGTTCTT TTGCTGAGTT TAAAGCTAAA TTCACTGATA GTGCTATCAA CAACTTCGGC 
TCTAGCTGGA CTTGGTTAGT AAAGAATGCC GATGGCAGTT TAGCTATCGT TAATACTTCA 
AATGCAGCAA CACCATTGAC TGACGAAGGT GTTACGCCAC TTATTACTGT AGATTTATGG 
GAACATGCTT ACTACATTGA TTACCGTAAC GTAAGACCTG ATTACCTTAA CGGTTTTTGG 
GCATTAGCTA ACTGGGATTT TGCTCAAGCT AACTTTAGCT CGTAA 

 

Protein sequence

MSIELPALPY EQNALEPHIS AETLSFHYGK HHNTYVVKLN GLIGGTEFEN KSLEEIVKTS 
SAGIFNNAAQ IWNHTFYWNS LSPNAGGEPS GDLLAAINSN FGSFAEFKAK FTDSAINNFG 
SSWTWLVKNA DGSLAIVNTS NAATPLTDEG VTPLITVDLW EHAYYIDYRN VRPDYLNGFW 
ALANWDFAQA NFSS