| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3460 |
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| Symbol | dapB |
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| ID | 3521596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3596618 |
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| End bp | 3597424 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285908 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_270134 |
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| Protein GI | 71281125 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.734477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA AAGTAGCTAT TTTAGGTTGC AGTGGACGTA TGGGACGCAA TTTAATTCAA
GCAGCTCATG AGCATGCAAG TATCGAATTA GTTGGTGGTA GCGTACGTAC CAGTTCATCT
TTTGTCGATT TTGATCTGGG GGAATTGGCG GGTATTGGTG CCATTGGTAT TAAAACATCA
ACAACGTTAG CTCAATTGGC TACAGCAGAT GTTTTTATTG ATTTTACCTC AATAGAAACG
ACGCTAGAAA ACCTTACTTG GTGTAACGAA AATAAAAAAG CGTTAGTTAT CGGCACGACA
GGTTTTTCTG ATGAACAAGT GCAGGTTATT GAACAAGCAG GTAAAACTAT GTCTGTTATC
TTAGCGCCTA ATACCAGTGT TGGCGTTAAT TTAATGTTTA AATTATTGCA AGTTACAGCA
AAAGCCATTG GTGACTATAC AGATATTGAG ATTTTTGAAG CGCATCATCG ATTTAAAAAA
GATGCACCGT CTGGGACTGC TGTCAAAATG GGGCAAGTTA TAGCTGATAC GTTAGGACGT
GACCTGAATA AAGTTGCTGT TTATGGGCGT GAAGGCATAA CAGGAGAACG TGATCGAGAA
ACTATCGGTT TTGCAACTGT TAGAGCTGGC GATATTGTTG GCGAACATAC TGCATTTTTC
GCAGATTTAG GCGAAAGACT TGAAATTACG CATAAAGCTA GTTCTCGAAT GACATTTGCT
CTAGGCGCTA TGCGAGCAGC ATTTTGGTTA AAAGATGCTG ACGCTGGTTT TTATGATATG
CAAGACGTAC TCGGATTAAA AGATTAA
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| Protein sequence | MKVKVAILGC SGRMGRNLIQ AAHEHASIEL VGGSVRTSSS FVDFDLGELA GIGAIGIKTS
TTLAQLATAD VFIDFTSIET TLENLTWCNE NKKALVIGTT GFSDEQVQVI EQAGKTMSVI
LAPNTSVGVN LMFKLLQVTA KAIGDYTDIE IFEAHHRFKK DAPSGTAVKM GQVIADTLGR
DLNKVAVYGR EGITGERDRE TIGFATVRAG DIVGEHTAFF ADLGERLEIT HKASSRMTFA
LGAMRAAFWL KDADAGFYDM QDVLGLKD
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