| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3458 |
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| Symbol | carB |
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| ID | 3520274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3591932 |
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| End bp | 3595147 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285906 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_270132 |
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| Protein GI | 71279813 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAC GTACTGATTT AAAAAGTATC TTGATCTTAG GTGCAGGTCC AATCGTGATT
GGCCAAGCCT GTGAGTTTGA TTATTCTGGC GCTCAAGCGT GTAAAGCACT TCGTGAAGAA
GGTTATCGAG TTATTTTAGT TAACTCTAAC CCAGCAACGA TAATGACTGA CCCTGATATG
GCCGATGCGA CTTATATCGA ACCAATTCAC TGGGAAGTTG TACGTAATAT TATTGAAAAA
GAACGTCCTT GTGCTGTTCT ACCTACTATG GGTGGTCAAA CCGCATTAAA CTGTGCTTTA
GAACTTGAAG CCAAAGGCGT ACTAAAAGAA TTTAATGTTG AAATGATTGG TGCTACTGCT
GACGCAATTG ATAAAGCAGA AGACAGATCT CGTTTTGATA AAGCAATGAA AGCGATTGGT
CTTGATACGC CAAATGCTGA GATTGTACAT ACTATTGAAG AAGCGCACGC GGCAAGTAAA
GTATTAGGTT TCCCTTGTAT TATACGTCCT TCATTTACCA TGGGTGGCAC CGGTGGCGGT
ATCGCATACA ACATTGAAGA ATTTGATGAA ATTTGTACTC GTGGCTTAGA CCTTTCTCCA
ACATCAGAAT TACTAATCGA TGAATCATTA ATCGGTTGGA AAGAATATGA AATGGAAGTG
GTTCGCGACA AAAATGATAA CTGTATCATT ATTTGTGCGA TTGAAAACAT TGACCCTATG
GGCATCCACA CGGGCGATTC AATTACTGTT GCACCAGCGC AAACATTAAC TGATAAAGAA
TACCAAATTA TGCGTAACGC TTCTTTAGCG GTATTACGTG AAATTGGTGT TGAAACAGGT
GGTTCAAACG TACAGTTTGG TATTTGTCCT GAAACTGGCC GTATGGTTAT TATCGAGATG
AACCCACGTG TATCTCGTTC ATCAGCATTA GCATCAAAAG CAACAGGTTT CCCTATTGCT
AAAATCGCGG CTAAGTTAGC GGTAGGTTAT ACGCTAGATG AGTTAAGTAA TGATATTACT
GGTGGCAAAA CACCAGCATC ATTTGAACCA ACCATCGATT ACGTTGTAAC TAAGATCCCA
CGTTTTAACT TTGAAAAATT CGCTGGCGCA GAAGACAGAT TAACTACGCA AATGAAATCT
GTTGGTGAAG TAATGGCTAT TGGCCGTAAC CAACAAGAAT CTATGCAAAA AGCATTACGC
GGCTTAGAAG TTGGCGTTAA TGGTTTTGAT TCAATTGTTG ATGTAACTCA GCCCGGTGCT
AAAACCAAAA TAATGCATGA GCTTCAAGAA GCAGGTGCTG ACCGTATCTG GTATGTAGCC
GATGCGTTTC GTTTAGGTTT AACCGTTGAA GACGTTTATA GAACAACAAT GATTGATCGT
TGGTTCTTAG TACAAATTGA AGACATTGTT TTAGAAGAAG CAAAAGTTAG CGAAGGCGGT
TTAAAAATAC TAAACCCTGA GTATCTACGT AAACTTAAGC GTAAAGGTTT TGCCGATTCT
CGTTTAGCTG ATCTTATTGG TGTATCTGAA GCTGAAGTAC GTAAAAAACG TCATAACGCA
GATATTTATC CAGTTTACAA ACGAGTTGAT ACTTGTGCGG CAGAGTTTAG CTCTGATACG
GCTTATATGT ATTCAACATA CGATGAAGAA TGTGAATCAA ACCCGACCGA CAAAGAATCA
ATTATGATTC TAGGTGGTGG CCCTAACCGT ATTGGTCAAG GTATTGAATT TGATTACTGT
TGTGTTCATG CAGCATTAGC ATTACGTGAA GATGGTTATG AAACTATCAT GGTTAACTGT
AACCCTGAAA CAGTTTCTAC CGATTACGAT ACGTCAGACC GTTTATACTT TGAATCAATT
ACTTTTGAAG ATGTACTTGA AATTGTTCGT ATTGAAAAAC CTAAAGGCGT TATCGTGCAA
TATGGTGGTC AAACACCACT TAAATTAGCA CGTGCTTTAG AAGCCGCTGG CGTACCAATA
ATTGGTACTT CTCCAGACGC TATTGATAGA GCTGAAGATA GAGAACGTTT CCAGCAAGCA
GTTGACCGTT TAGGTTTATT GCAACCTGAA AATGCCACCG TAACTTCGTT AGAAGAAGCT
ATGGCTAAAG CCGAAGGTAT TGGCTTCCCG TTAGTTGTAC GTCCATCTTA TGTATTAGGT
GGCCGAGCGA TGGAAATCGT TTATGACTTA GACGACTTAC GTCGTTACAT GACAGAAGCG
GTAAGTGTTT CTAATGATTC GCCAGTATTA CTTGATCACT TCCTTGATGA TGCGATTGAA
GTTGATATTG ACGTAGTTTG TGATGGCACT GATGTCGTTA TTGGCGGCAT TATGCAGCAT
ATTGAACAAG CCGGCGTTCA CTCAGGTGAT AGCGCATGTT CATTACCAGC TTATAGCTTA
AGCCAAGAAA TACAGGATGT TATGCGTAAG CAAGTAACAG ATTTAGCGTT TGAGCTAGGT
GTTATTGGTT TAATGAATAC GCAAATGGCA GTTAAAGACA ATGAAGTTTA TATCATTGAA
GTTAACCCAC GTGCAGCACG TACTATTCCG TTTGTTTCAA AAGCAACGTC AGTACCACTT
GCTAAAGTCG GCGCACGCGT AATGGCGGGC AAATCACTGA AAGAGCAGGG CATAACCAAG
GAAGTTATTC CGAAGTATTT CTCTGTTAAA GAAGTTGTGA TACCGTTTAA CAAGTTTCAT
GGTAGTGATC CTTTAGTTGG ACCAGAAATG CGTTCAACAG GTGAAGTAAT GGGCGTAGGT
GATACGTTTG AAGAAGCTTA CGCAAAAGCA AATCTAGGCG CTGGTGTATC TGTTCCTAAA
ACAGGTCGTG CTTTAATATC TGTACGTAAT AGTGATAAAA AACGTGTACT TGAATTAGCT
AAAATCATGG TTGATTTGGG TTATGATATA GATGCAACTC ACGGTACTGA AGTGATTTTA
CGTGAAGCGG GTGTTCCGGT TCGTCGTGTT AATAAAGTAC ATGAAGGTCG TCCACATATT
CTTGATAGAA TCAAAAATAG TGAATACAGC TATATTATTA ATACTACTGA AGGTCGTAAA
GCTATTGAGG ATTCAAAAGT ATTACGTGGC GGTGCATTGC GTTATAAAGT TGCTTACACA
ACGACATTAA ATGCTGCATT TGCTAGCTGT ATGGCTCATG CTGCAGATGA AATGAGTACT
GTGCGCACTG TGCAAGAGCT ACACAATACG TTGTAA
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| Protein sequence | MGKRTDLKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPDM
ADATYIEPIH WEVVRNIIEK ERPCAVLPTM GGQTALNCAL ELEAKGVLKE FNVEMIGATA
DAIDKAEDRS RFDKAMKAIG LDTPNAEIVH TIEEAHAASK VLGFPCIIRP SFTMGGTGGG
IAYNIEEFDE ICTRGLDLSP TSELLIDESL IGWKEYEMEV VRDKNDNCII ICAIENIDPM
GIHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGICP ETGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELSNDIT GGKTPASFEP TIDYVVTKIP
RFNFEKFAGA EDRLTTQMKS VGEVMAIGRN QQESMQKALR GLEVGVNGFD SIVDVTQPGA
KTKIMHELQE AGADRIWYVA DAFRLGLTVE DVYRTTMIDR WFLVQIEDIV LEEAKVSEGG
LKILNPEYLR KLKRKGFADS RLADLIGVSE AEVRKKRHNA DIYPVYKRVD TCAAEFSSDT
AYMYSTYDEE CESNPTDKES IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFESI TFEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPI
IGTSPDAIDR AEDRERFQQA VDRLGLLQPE NATVTSLEEA MAKAEGIGFP LVVRPSYVLG
GRAMEIVYDL DDLRRYMTEA VSVSNDSPVL LDHFLDDAIE VDIDVVCDGT DVVIGGIMQH
IEQAGVHSGD SACSLPAYSL SQEIQDVMRK QVTDLAFELG VIGLMNTQMA VKDNEVYIIE
VNPRAARTIP FVSKATSVPL AKVGARVMAG KSLKEQGITK EVIPKYFSVK EVVIPFNKFH
GSDPLVGPEM RSTGEVMGVG DTFEEAYAKA NLGAGVSVPK TGRALISVRN SDKKRVLELA
KIMVDLGYDI DATHGTEVIL REAGVPVRRV NKVHEGRPHI LDRIKNSEYS YIINTTEGRK
AIEDSKVLRG GALRYKVAYT TTLNAAFASC MAHAADEMST VRTVQELHNT L
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