Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3453 |
Symbol | rrmJ |
ID | 3520225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3588574 |
End bp | 3589203 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285901 |
Product | 23S rRNA methyltransferase J |
Protein accession | YP_270127 |
Protein GI | 71279764 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA AAAAACACAA AGCGAGTAGT CAGCGTTGGT TAGATGAACA CTTTGATGAT GAATACGTAA AAAAAGCGCA ACGTTTAGGG TTACGCTCAC GTGCAGTTTT CAAACTTGAA GAGATCAATA TTAAAGATAG ATTGATTAAA CCAGGTATGA AAGTTGTCGA TTTAGGTGCA GCCCCAGGTG GTTGGTCAGA ATATGCTGTT AAGGTTGTAG GTGATAAAGG GCAGGTTGTT GCTTGTGATA TTTTACCTAT GGATGCCATT GTTGGTGTTG ACTTTCTTGA AGGTGACTTT AGAGAAGAAG AAGTACTTGA TGCATTATTG ACTCGTATAA ATGGCAAAAA TATTGACGTT GTTATGTCTG ATATGGCGGC GAATATGACT GGTAATGAAA GTGCTGATTC AGCGCGTAGT ATGTATCTTG TTGAGTTAGC ACTAGATATG TGTAGCCAAG TATTAAAACC TAATGGCGCA TTTGTGGTAA AAGTATTTCA AGGTGCTGGC TTTGAAGATT ACATGAAAGC GACCCGTGCA GTATTTAAAG CGGTTAAAAC CCGTAAGCCA GAATCTTCTA GAGCGCGTTC GAGAGAAGTA TATTTAGTGG CTACTGGCTA CAAAGGTTAG
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Protein sequence | MANKKHKASS QRWLDEHFDD EYVKKAQRLG LRSRAVFKLE EINIKDRLIK PGMKVVDLGA APGGWSEYAV KVVGDKGQVV ACDILPMDAI VGVDFLEGDF REEEVLDALL TRINGKNIDV VMSDMAANMT GNESADSARS MYLVELALDM CSQVLKPNGA FVVKVFQGAG FEDYMKATRA VFKAVKTRKP ESSRARSREV YLVATGYKG
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