Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3452 |
Symbol | ftsH |
ID | 3519317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3586434 |
End bp | 3588416 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637285900 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_270126 |
Protein GI | 71279193 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.380893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA ATCTTATTTT ATGGTTAGTT ATTGCAGTTG TTTTGATGAG TGTATTTCAG AGTTTTTCTC CAAATACCAC AGAAGATCAA CAAATGGATT ACACCCGCTT TATTCAGGAT GTACGTCAAG GACAGATTCG CGATGCGAGT GTTGATAGAA ATGGCGTAAT CACGGGTGAA AAGCGTAGTG GCGAAGCATA CAAAACCGTT ATACCTGGTG GCTATGATCG TGATTTAATT AACGATCTTG TTAAACAGGG TGTTCGTGCT GAAGGTAAAT TACCTGAAGA AACGAGTTTC TTAACGACTA TTTTCGTTTC TTGGTTCCCA ATGATTTTGC TTATTGGTGT ATGGATTTTC TTCATGCGTC AAATGCAAGG TGGTGGCGGC AAAGGAGCTA TGTCTTTTGG TAAGTCTAAA GCACGTCAGT TAAGTGAAGA GCAAATCAAA ACGACTTTCG CCGATGTGGC TGGTTGTGAT GAAGCGAAAG AAGACGTTGC TGAATTAGTT GATTACTTGC GTGAACCTAG CCGTTTTCAA AAGCTTGGTG GGCGTATTCC ATCAGGTATT TTACTTGTCG GTCAACCAGG TACAGGTAAA ACCTTATTAG CGAAAGCTAT TGCTGGTGAA GCGAAAGTTC CTTTCTTTAC TATTTCAGGC TCAGACTTTG TTGAAATGTT TGTTGGTGTT GGTGCATCTC GTGTACGTGA CATGTTCGAA CAAGCTAAAA AAGCGGCTCC TTGTATTATC TTCATCGATG AAATCGATGC GGTAGGTCGC CAACGTGGCG CTGGTATGGG TGGTGGTCAT GATGAACGTG AGCAAACACT TAACCAAATG TTAGTTGAAA TGGATGGTTT TGAAGGTAAT GAAGGCGTTA TCGTTATTGC CGCAACTAAC CGTCCTGACG TATTAGACCC TGCATTACTT CGTCCTGGTC GTTTTGACCG TCAAGTAACC GTTGGTTTAC CTGATATTCG AGGTCGTGAA CAAATTCTTA AAGTACATAT GCGCAAAGTA CCATTAGGTG ATGATGTTAA AGCTGAAGTT ATTGCGCGTG GTACGCCAGG CTTCTCTGGT GCAGATTTAG CTAACTTAGT GAATGAAGCT GCTTTATGTG CTGCACGTAC GGCGCGTCGT GTTGTTAGCA TGAAAGAATT CGATGCTGCT AAAGACAAAA TAATGATGGG CTCAGAACGA AAATCAATGG TAATGAGTGA GTCTGAAAGA GAAATGACTG CTTATCATGA AGCTGGGCAT GCAATCATTG GTCGTTTAGT GCCAGATCAT GATCCTGTTT ATAAAGTGAG TATTATTCCT CGTGGCCGTG CTCTTGGTGT GACTATGTAC TTACCAGAAC AGGATAGATT TAGCCATTCT AAGCAACATC TAGAAAGTAA CATTTCTTCT TTATATGGTG GTCGTGTTGC CGAAGAAGTT ATTTACGGTA GTGATAAAGT TTCTACTGGT GCTTCGAACG ATATTGAGCG TGCAACTAAC ATTGCTCGCA AAATGGTAAC TCAATGGGGC TTATCTGAAA AAATGGGTCC TATGTTATTC GCTGAAGAAG AAGGTGAAGT ATTCTTAGGT CGTACGTCTG CAAAATCATT GCATATGTCT GATGAAACAG CGAAAACAAT TGATGAAGAA ATTAAATCAG TAATTAGCCG TAACTATCAA CGAGCAGAAG ACTTAATCAA AGCAAACATG GATGTATTAC ATGCCATGAA AGATTGTTTG ATGAAGTATG AAACGATTGA TGCCTTACAA ATTGATGACT TGATGGCTAG AACATCTGTT CGTCCTCCTG CTGGTTGGGA AGACAAAGGT GGTTCAAGCT CTAATTCGGA TGACAGCAAA GGTGATAAAG CTGCAGATGT TGAAGCGACG GATAAAGATG CTGAAACAAC TAGTGACCCA GAAGAAACTA GTCAAGTAAA ACCTGATACA ACTAAGCCAA GTGGTGATAC ACCAGCAAGC TAA
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Protein sequence | MAKNLILWLV IAVVLMSVFQ SFSPNTTEDQ QMDYTRFIQD VRQGQIRDAS VDRNGVITGE KRSGEAYKTV IPGGYDRDLI NDLVKQGVRA EGKLPEETSF LTTIFVSWFP MILLIGVWIF FMRQMQGGGG KGAMSFGKSK ARQLSEEQIK TTFADVAGCD EAKEDVAELV DYLREPSRFQ KLGGRIPSGI LLVGQPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE QAKKAAPCII FIDEIDAVGR QRGAGMGGGH DEREQTLNQM LVEMDGFEGN EGVIVIAATN RPDVLDPALL RPGRFDRQVT VGLPDIRGRE QILKVHMRKV PLGDDVKAEV IARGTPGFSG ADLANLVNEA ALCAARTARR VVSMKEFDAA KDKIMMGSER KSMVMSESER EMTAYHEAGH AIIGRLVPDH DPVYKVSIIP RGRALGVTMY LPEQDRFSHS KQHLESNISS LYGGRVAEEV IYGSDKVSTG ASNDIERATN IARKMVTQWG LSEKMGPMLF AEEEGEVFLG RTSAKSLHMS DETAKTIDEE IKSVISRNYQ RAEDLIKANM DVLHAMKDCL MKYETIDALQ IDDLMARTSV RPPAGWEDKG GSSSNSDDSK GDKAADVEAT DKDAETTSDP EETSQVKPDT TKPSGDTPAS
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