Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3433 |
Symbol | |
ID | 3519835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3572528 |
End bp | 3573889 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637285881 |
Product | hypothetical protein |
Protein accession | YP_270108 |
Protein GI | 71279380 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.451735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT ATATTACAAC TGCAAGTTTA CTGATGTTAT CACTGGTAAG TAGTGCTGCA TTGGCAAAAG TTAGCCCACA AGAAGCTGAT AAATTAGGTA AAACGCTAAC TCCATTAGGT GCTGAAATGG CGGCCAATGC AGCCGGAACT ATTCCAGCCT GGAGCGGAGG ATTAACCAGT AAAAACTCAA CTAAAAGTAA AGACTCTGGA CGCCCTGAAA ATCCTTTTAG CCAAGACAAA CCATTATTTG AAATAACGCG CGCTAATTTT GATGATTACA AAGCGAACTT AAGTGCTGGC CAAATTGCAA TGTTTGAAAA ATACGCTGAT TATAAAATGC CTATTTATAA AACAAGAAGA ACAGCCGCCT ACTCAAATGA ACTTTATGAT GTTGTTAAGA AAAATGCGAC AACCGCTGAA CTAGTACAAT CGGGTAATGG TGTCGAAAAT TTTGAGACAA CAATCCCCTT TCCTATTGCA CAAAATGGCT CTGAAGTTAT TTGGAACCAC ATCACCCGTT TTCGTGGCGG CACAGCTAAA CGTTTTACCA CTACCATTCC AGTGCAATCA AATGGCTCAT TTGTGCCCGT TAAAATGAAT GATCAATTGG TATGGCCTGA GTTTTTAAAA GGCGGGCGTG ATGCTAAAAA AGATAACAAT ATTTTGTTTT ATTATCTTTC TCAAATTACC GCACCTGCAC GTTTAACAGG TACGGCTTTA TTAGTACATG AAACCATGGA TCAAGTAAAA GAAGCGCGTA AAGCTTGGGT TTATAACTCT GGTCAACGTC GTGTTCGCCG TGCACCAAAC GTTGCTTATG ATGGACCAGG TCAAGGTACT GATGGTTTAA GAGCCTCTGA CAACTATGAC ATGTATAACG GAGCACCTGA TCGTTATAAC TGGAAACTAG TCGGCAAACA AGAGCTTTAT ATTCCATACA ACTCTTATAA CTTACTTGAT ACCACAGCAA AATATGATGA CGTAATACAA AAGGGTCATT TGAATACTGA TTATTTACGC TACGAGTTAC ACCGTGTTTG GCAAGTTGAA GCAACCTTAA AGGAAGGCTC AAGACATATT TACGCTAAAC GTACCTTCTT TATTGATGAA GATACATGGG GTGCCTCTGT TATTGATCAA TACGATGGCC GTGGTCAACT ATGGAAATTA TCAGAAGCGC ATAACATTCA ATTTTATGAT GTTGATACTC CGTGGATGGT TGCTGAAACC TTATATGACA TAGACTCTGG ACGTTACCTA GTAACAGGGT TAAGCAATGA AGAGCCAACC TTCATGATTT GGGGTGAAAA AGTAAAACGC AAAGATTTTT CTACCTCTGC TCTTAGACGT TTAGGACGTT AA
|
Protein sequence | MKKYITTASL LMLSLVSSAA LAKVSPQEAD KLGKTLTPLG AEMAANAAGT IPAWSGGLTS KNSTKSKDSG RPENPFSQDK PLFEITRANF DDYKANLSAG QIAMFEKYAD YKMPIYKTRR TAAYSNELYD VVKKNATTAE LVQSGNGVEN FETTIPFPIA QNGSEVIWNH ITRFRGGTAK RFTTTIPVQS NGSFVPVKMN DQLVWPEFLK GGRDAKKDNN ILFYYLSQIT APARLTGTAL LVHETMDQVK EARKAWVYNS GQRRVRRAPN VAYDGPGQGT DGLRASDNYD MYNGAPDRYN WKLVGKQELY IPYNSYNLLD TTAKYDDVIQ KGHLNTDYLR YELHRVWQVE ATLKEGSRHI YAKRTFFIDE DTWGASVIDQ YDGRGQLWKL SEAHNIQFYD VDTPWMVAET LYDIDSGRYL VTGLSNEEPT FMIWGEKVKR KDFSTSALRR LGR
|
| |