Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3432 |
Symbol | |
ID | 3520718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3570635 |
End bp | 3572497 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637285880 |
Product | hypothetical protein |
Protein accession | YP_270107 |
Protein GI | 71280254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0727302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATA ATAATCACAA AATCAAACCA TTAGCTCTGG TTGTCGCTAT GGCGCTTAGT GCGTCATCAG CGCACGCTGT AGACTTTAAT TTTGGTGAAG ACGATGACAT TTTATTGCAA ATAAATTCTC AATTGGATAT TGGTTCAAGC TGGCGACTAG GCGATGCTGA CCCACGATTT ATTGGTAAAA CTAACGGTGG AACTGGCGCT ACAAGTACCA CAGATGATGG CAACTTGAAC TACTCAAAAC ATGATGCCTA CTCACAAATA ATTAAAGGTG TGCATGATAT TCAATTAAGC AAAGGCGATT TTGGTGCTTT TGTGCGCTTT AAATATTGGT ATGACTATGC ACTCAAAGAA GGTGATGTGA ACCATGGTAA CTCAGGTAAT GGTTATGTCC CGAATACGCC ATTAAGCGAT GATGGATTTG AAAATAATAC TAAATTTTCT GGCGCCACCT TATTAGATGC CTACGTTTAT GCTTCGTTTG ATTTAGCAGA TACTCCAGTA GACATACGCC TAGGTAGACA AGTGGTTAGT TGGGGCGAAA GTACATTTAT TCAGGGTGGC ATGAATTCGT CGAACCCTTT TGATGTCGCA GCCTTAAGAC GCCCTGGTGC AGATTTAAAA GAAGGTATTT TACCTGTTGG CATGCTCTAC GGTAACGTCG GTCTCACTGA AAACCTAAGT GTTGAAGCTT TTTATCAATA CGAGTGGGAG AAAACTCAAA TTGACGGTTG TGGTACTTAT TTTTCTGGGG CTGATTTTGC AGCAACTGGC TGTAATTATG TTTCTGTTGG TCCTTTAGGC GATCAAGCTG GATTGGCTGC AGGTTTTGCC GCTGAGCGAA TAGCGGATGT TGAGCCTGAT GACGGCGGTC AATATGGTTT AGCCGCGCGT TATTATGCTG AAGAATTAAA TGATACCGAG TTTGGAATAT ACTACATGAA TATTCATTCT CGCCTACCAC TGATTAACAC AGTACGTACT AATATCCCGC CGACTTATGC TGCAATTACC GGTGATGATA TTGCTAACTC ACCCGTTTTT GTACCAGAAG CATTGGATCC AACAGGTGGC GCTTTCGCCG CACAAAATCC AGGTTATGAC ATTGAATTTC CAGAAGACTT AAAGTTTTAC GGCGTTAGCT TTGCTACCAA TGTTGGTGGT GTAGCACTAT CAGGTGAAGC CTCTTATAAA CCTGATACTC CGGTACAGAT CAGCGGACCA GAATTACTCA ACGGTACCTT ATCTGAAGCG CCATTCTTAC GCTTTACCCC AAGAGTTACC GCAGTTGGTT ATGGTGAAGA GGTGAAAGGT TGGGACGAGT TTGATGTAAC CCAATTGCAG ATGACTGCGA TTCAATTTTT TGAAAACACC ATGGGAGCTT CACGAGTCAC AGTTATTGCC GAAGTGGGCA TGATTTTAAC TGATGGCGTT GAAGACTCTG ATCAACATTA CGGTAGAAAC TCAGTCTTTG GATTGGGGGA TTTTGATGCT GGTGGCGGCT TAAATTGTAG CAACCTTGTC AATGCAGGCG CGTTATCAGG CGATTGTCGC ACTGATGGTT TTGTTACTGA TAGTGCATGG GGTTATCGCA TGCGGGCTGT TTGGCAATAT TCTGATGTAT TTGCCGGCGT ATCGTTAAAG CCAACACTTT CTTGGGCACA TGATGTTAAT GGTTACTCGC CAGATCCAGC CCAACAATTT CATGAAGGGC GGAAGAATCT AGGTTTTTCT TTAGAAGCGG CCTATCAGCA AAAATATACC GTCACCGTAG GCTACAACAA CTATTCAGGT GGTAGTCATA ATATTTTAGA AGATAAAGAC CTAGTATCGC TGTCATTTGG CCTTTCATAT TAA
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Protein sequence | MLNNNHKIKP LALVVAMALS ASSAHAVDFN FGEDDDILLQ INSQLDIGSS WRLGDADPRF IGKTNGGTGA TSTTDDGNLN YSKHDAYSQI IKGVHDIQLS KGDFGAFVRF KYWYDYALKE GDVNHGNSGN GYVPNTPLSD DGFENNTKFS GATLLDAYVY ASFDLADTPV DIRLGRQVVS WGESTFIQGG MNSSNPFDVA ALRRPGADLK EGILPVGMLY GNVGLTENLS VEAFYQYEWE KTQIDGCGTY FSGADFAATG CNYVSVGPLG DQAGLAAGFA AERIADVEPD DGGQYGLAAR YYAEELNDTE FGIYYMNIHS RLPLINTVRT NIPPTYAAIT GDDIANSPVF VPEALDPTGG AFAAQNPGYD IEFPEDLKFY GVSFATNVGG VALSGEASYK PDTPVQISGP ELLNGTLSEA PFLRFTPRVT AVGYGEEVKG WDEFDVTQLQ MTAIQFFENT MGASRVTVIA EVGMILTDGV EDSDQHYGRN SVFGLGDFDA GGGLNCSNLV NAGALSGDCR TDGFVTDSAW GYRMRAVWQY SDVFAGVSLK PTLSWAHDVN GYSPDPAQQF HEGRKNLGFS LEAAYQQKYT VTVGYNNYSG GSHNILEDKD LVSLSFGLSY
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