Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3431 |
Symbol | |
ID | 3519585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3569450 |
End bp | 3570475 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637285879 |
Product | AraC family transcriptional regulator |
Protein accession | YP_270106 |
Protein GI | 71277946 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.147255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGATT ATTATTCAAC GTTGATTGGC TGGATGATCC CGATTTCAAG GGCAATGGAA GCTCACCAGA TTGATCTTAC AACGGCACTT AAAGAATGTA ATATTTCTCA AGATGTTATG ACAGACCAAG AATCTCGTAT TGCTGCCGAA AAGTTTTATA ACTTAATAGA GTATTGTAAT AAGAAATTAG GACGACATGA TTTTTCTATT TTAATTGCGG AACAATTCCA TCCCGGTATG TTTCATGCGC TTGGTTACGC CATGATGTCT TCTAACACAT TGCAAGATGC TCTAGACAGA ATAGCTCATT ATAAACGTGT AGTTTCAAAT ACTTGCCAAT TAGTTACCTA CGAGAGTAAT AACCAATTAG TTTTTGAAAT GAATATTTTT ACTTATGAGG GAACTAATCG TCCCGTATTA TCACTTGCAA CAGTCGAAAC CTTTTTAGCG ACCATTATCC GTTTTGCTAG AGAGTTGGTT ACTTTAGATT TCTCACCTGA AAAAATTTGT TTTGCTTATC AAAAACCTGC TCATGATGTG ACTTACCTCG AAGAGTTTTT CAATTGTGAC ATAGAATTTA ATAGCGATAA AAACGCTATT ATTTTTAATT TTGAGCAAGC ACAAGAAAAG CTAATGTGTG GCAACCCTTT AATTACGCAT AGTCACGAAA AAATGCTTGA TGAATTCATG GCAAGAATTG ATAAAAATGA TTTAAGCCAT GTCATCAAAA ATAAAATCTT TGATTTATTG CCGTTAGGTG CTCCTTCACA AATAGTTATA GCTGAAGACC TAGGAATGAG TTTGCGTAAT TTACAACGAA AACTACAAGA GCAAGGCACA AGTTACAAAG AAATATTAGA AAGTACCCGT AAAAAATTAG CAATGGATTA CATTGTGCAA CAACATTTAA GTTTGAGTGA AATTGGCTAT TTGGTTGGTT TTTCGAGCGT AGGCAACTTT AACCGTGCTT TTAAACGTTG GACAAATCAA ACACCTGGTG AATACCGACA AAGCAAAAAA ACCTAA
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Protein sequence | MQDYYSTLIG WMIPISRAME AHQIDLTTAL KECNISQDVM TDQESRIAAE KFYNLIEYCN KKLGRHDFSI LIAEQFHPGM FHALGYAMMS SNTLQDALDR IAHYKRVVSN TCQLVTYESN NQLVFEMNIF TYEGTNRPVL SLATVETFLA TIIRFARELV TLDFSPEKIC FAYQKPAHDV TYLEEFFNCD IEFNSDKNAI IFNFEQAQEK LMCGNPLITH SHEKMLDEFM ARIDKNDLSH VIKNKIFDLL PLGAPSQIVI AEDLGMSLRN LQRKLQEQGT SYKEILESTR KKLAMDYIVQ QHLSLSEIGY LVGFSSVGNF NRAFKRWTNQ TPGEYRQSKK T
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