| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3427 |
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| Symbol | fadD2 |
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| ID | 3523107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3562424 |
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| End bp | 3564064 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285875 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_270102 |
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| Protein GI | 71282632 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.115009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAT CTTGGTTTAC CAATTATCCT GAAAACGTGG CACATACTGT CGACTTAAGC
CGTTATTCTT CTTTAACCGA TTTACTGCAA CAAACCTCAG CAAAGTATCA GAAGAACACT
GCTTACAGTA ATTTTGGTGC GGAACTTACT TTTGAACAAG TAGATGAATT ATCACGCGAT
TTTGCCGCTT ATTTACAAAA TAAATTGAGC GTCGTCAAAA ATGATCGTGT GGCACTAATG
TGTCCTAATA CCTTATGTTT TCCGATAGCC ATGTGGGGCA TCATTCGTGT TGGTGGTGTA
CAAGTTAATG TTAACCCTAT GTACACGCCA AGAGAGCTAG AACACCAACT TAATGATGCG
CAAGTTGATA CGATTATAAT TTTCTCTCCG TCAACCCAAA TGTTAGCCGA GATTTTAGAT
AATACGGGTA TTAAGAATAT TATCACTGTC GATTTAGATG ACTTAGTTAA TAAAGGTTTA
CCTTGTGCAG GGGTAGACGA ACGTTTAACT AATACCATCA GTTTTACTGA TGCGCTAGCG
CAGGGTAAAA CTCTGGGTTT GAATGAGCCA GCATTATGCC AAGATGACTT ACTGTTTTTG
CAATATACCG GTGGTACCAC AGGTTTATCT AAAGGGGCTA TGCTGAGTCA TGGCAATTTA
ATCGCTAATA TATTGCAATA TAAAGAATTT GCTAAAGCGC ATATTGATTA CGGCAATGAC
ATTGTTATCA CCGCTATCCC GATGTACCAC ATCTTTGCTT TGATGGCGAA TACCCTTAGT
TATTTTAGCT TTGGCGCTAA AAATGTTTTA GTCACCAATC CACGTGATAT GCCGAGCTTT
GTTGAGGTGT GGAAAAATAC CCCAGCGACT ATGTTTACCG GCGTTAACAC CTTATATAAC
GGCTTATTAC ATACGCCAGG CTTTGAAAAC GTTGATTTCT CCTCATTGAA ACTTTGTATT
GGCGGCGGCG CAGCCGTTCA GCAAGCAGTG GCTGATAAAT GGCGACAAGT TACCGGGGTT
AAACTGCAAG AAGGTTATGG TTTATCAGAA ACTTCACCTA TTTTAACGTT AAATTTTGGT
AGTGTAGATC ATACTGATGA TGTTCCTGGT ATCGGTGTAC CCGTGCCTAA CACTGATATT
TCCATTCGTG ATGTGATGGG TAATAGTGTT GAACAAGGCC AGTCAGGTGA ATTATGTGCC
AAAGGCCCGC AAGTGATGTC GGGTTATTGG AATAATGTTG CAGCAACCAC TGAATGTATG
ACCCCTGATG GGTATTTCAA AACAGGTGAT GTTGCCATGT TAGACGAACA TGGATTTTTC
CATATTGTCG ATCGCATAAA AGATATGATT AATGTTTCGG GTTTCAATGT TTACCCAAAT
GAAATTGAAG CTGAAGTGGC CAAAATGCCA GGTATATTAG AATCTGCTTG TATCGGCGTT
GATGATGAGA AAACAGGTGA AGCGGTTAAG CTTTTTGTTG TTACTGATAA AGACTCTGAA
GATGCTAAAA TTACAGAGAA AGATGTCATC AGCTTTTGTC GCCAAGGTTT AACGGCTTAT
AAAGCACCTA AACATGTGGT CTTTATTGAT GAGATTCCTA AATCGAGTGT AGGTAAATTA
TTGCGCAGAG AGTTAAGGTA A
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| Protein sequence | MTKSWFTNYP ENVAHTVDLS RYSSLTDLLQ QTSAKYQKNT AYSNFGAELT FEQVDELSRD
FAAYLQNKLS VVKNDRVALM CPNTLCFPIA MWGIIRVGGV QVNVNPMYTP RELEHQLNDA
QVDTIIIFSP STQMLAEILD NTGIKNIITV DLDDLVNKGL PCAGVDERLT NTISFTDALA
QGKTLGLNEP ALCQDDLLFL QYTGGTTGLS KGAMLSHGNL IANILQYKEF AKAHIDYGND
IVITAIPMYH IFALMANTLS YFSFGAKNVL VTNPRDMPSF VEVWKNTPAT MFTGVNTLYN
GLLHTPGFEN VDFSSLKLCI GGGAAVQQAV ADKWRQVTGV KLQEGYGLSE TSPILTLNFG
SVDHTDDVPG IGVPVPNTDI SIRDVMGNSV EQGQSGELCA KGPQVMSGYW NNVAATTECM
TPDGYFKTGD VAMLDEHGFF HIVDRIKDMI NVSGFNVYPN EIEAEVAKMP GILESACIGV
DDEKTGEAVK LFVVTDKDSE DAKITEKDVI SFCRQGLTAY KAPKHVVFID EIPKSSVGKL
LRRELR
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