Gene CPS_3400 details

Gene Information

• Locus tag: CPS_3400
• ID: 3522472
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 3527842
• End bp: 3528522
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637285848
• Product: hypothetical protein
• Protein accession: YP_270075
• Protein GI: 71282000
• COG category: [K] Transcription
• COG ID: [COG2378] Predicted transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGTG CAGACAGACT TTTTCAAATC ATACAGTTGT TAAAGAATCG CCGTTTAACT 
ACTGCGAGTT TATTAGCAGA AGTACTCGAG GTGTCTACAA GAACTATTTA TCGAGATATT 
CAAGATCTCA TTGCCAATGG TATTCCTGTA GAAGGTGAAG CAGGTGTAGG GTATTTATTA 
CGTCGTGAAG TAGACGTACC ACCCCTTATG TTTAATGAGT CAGAACTTGA AGCGATTCAA 
GTAGGCATAA GAATGGTAGA AGCTTGGGGA GGTAGCGAAC TCGCGAGTTC AGCCAAACAA 
GCAATGATCA AAATATCTGC AGTTTTACCT GAAAGGCTGC AAACATTTAA CTCATTAATG 
TTTGCACCTA AGTTTCATGC CAAATCAAAT GAATTTCAAC ATCTAGACCT TTTACGTAAA 
GCGGCCACCG ATAGACAATA CCTTCAAATG GATTATGAAG ACGCTAAACA CGCGCAAACC 
AGTCGAGAAG TACGTCCACT CGCTATCCAC TTATGGAGAG GCTGTTGGAC ACTATTAACC 
TGGTGTGAAC TTAGAAATGA CTTTCGAAAC TTTCGCATCG ATAGGATAAT ATTGATTAAC 
CTTACTCCAC GATTTTTTCC TGTGGTAGAC GGTGAAGAAC TCGATGATTT CATCAAGGAA 
ATGCAAAGAA AGTATGGATA A 

 

Protein sequence

MRRADRLFQI IQLLKNRRLT TASLLAEVLE VSTRTIYRDI QDLIANGIPV EGEAGVGYLL 
RREVDVPPLM FNESELEAIQ VGIRMVEAWG GSELASSAKQ AMIKISAVLP ERLQTFNSLM 
FAPKFHAKSN EFQHLDLLRK AATDRQYLQM DYEDAKHAQT SREVRPLAIH LWRGCWTLLT 
WCELRNDFRN FRIDRIILIN LTPRFFPVVD GEELDDFIKE MQRKYG