Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3391 |
Symbol | |
ID | 3522009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3520996 |
End bp | 3521898 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285839 |
Product | membrane protein |
Protein accession | YP_270066 |
Protein GI | 71281537 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.483764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATA GAGATCTACT ACTCGGCATT TTTGTGATGA TTATTTGGGG GCTTAACTTT TCGGTGATCA AACTTGGCGT CAGTGAAATA GACCCTTTGT TACTCACCGC ATTACGTTTC AGTTTTGCCG TCATCCCTGC GGTGTTTTTT GTTAAAAGAC CACAGGTCAA ATGGCGATAT TTAATGGGCT ACGGACTCGT CTTTGCCATT GGTGTGTGGG GCATGGGTAG TTGGTCAATT CAGGCGGGGC TCTCTGCAGG TATGGCTTCA GTATTATTGC AGATGAATGT CGTGATTAGT TTATTAGTGG GCTACTTTGT ACTTAAAGAA ACTGTTGCTC CCATCAAAGT AGTTGGTAGC GTTGTTGCTA TTCTAGGTTT GGCGTTAAGC GTATCGGTAA CTGATGGCTC AGTGACAACG TTAGGTTTAG TCTTTATTTT AATCGCCGCT TTATCTTGGA GTATTACCAG TATTCTTGTT AAAAAAGCAG GAACCAAAGA GATTTTTGCC TTTAGTATCT GGGGCATGTT ATTTGCGCCG TTACCTTTAT TTGCACTCGC TTTTTTACGC GGTGGACCGG AGCAATTACA AACATTGAAT TCACTCGCTA ATGGCTCTGT TATTTTCTCT GTGTTATTTC AAGCCTACCC AGTTACGTTA TTTGGCTATT GGGTTTGGAA TCGCTTATTA GTGAAATACC CATTAAGCAC AGTTGCACCG TTAACTTTTT TGGTACCCAT TTTTGGTTTA TTAGGCAGTG CTATTTTTTA CCAAGAGCAA ATAGGGCTTG TCAAAGCACT CGCATGTTTA TTAATTATTG TGGGGTTAAT CATTGGCTTA ATAAAAACGG AAAAGTTAAA AGCGTATTTA CATCAACCTA AATCAGCGAA ACAAGTGGTT TAG
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Protein sequence | MNNRDLLLGI FVMIIWGLNF SVIKLGVSEI DPLLLTALRF SFAVIPAVFF VKRPQVKWRY LMGYGLVFAI GVWGMGSWSI QAGLSAGMAS VLLQMNVVIS LLVGYFVLKE TVAPIKVVGS VVAILGLALS VSVTDGSVTT LGLVFILIAA LSWSITSILV KKAGTKEIFA FSIWGMLFAP LPLFALAFLR GGPEQLQTLN SLANGSVIFS VLFQAYPVTL FGYWVWNRLL VKYPLSTVAP LTFLVPIFGL LGSAIFYQEQ IGLVKALACL LIIVGLIIGL IKTEKLKAYL HQPKSAKQVV
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