Gene CPS_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3391 
Symbol 
ID3522009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3520996 
End bp3521898 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content40% 
IMG OID637285839 
Productmembrane protein 
Protein accessionYP_270066 
Protein GI71281537 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.483764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATA GAGATCTACT ACTCGGCATT TTTGTGATGA TTATTTGGGG GCTTAACTTT 
TCGGTGATCA AACTTGGCGT CAGTGAAATA GACCCTTTGT TACTCACCGC ATTACGTTTC
AGTTTTGCCG TCATCCCTGC GGTGTTTTTT GTTAAAAGAC CACAGGTCAA ATGGCGATAT
TTAATGGGCT ACGGACTCGT CTTTGCCATT GGTGTGTGGG GCATGGGTAG TTGGTCAATT
CAGGCGGGGC TCTCTGCAGG TATGGCTTCA GTATTATTGC AGATGAATGT CGTGATTAGT
TTATTAGTGG GCTACTTTGT ACTTAAAGAA ACTGTTGCTC CCATCAAAGT AGTTGGTAGC
GTTGTTGCTA TTCTAGGTTT GGCGTTAAGC GTATCGGTAA CTGATGGCTC AGTGACAACG
TTAGGTTTAG TCTTTATTTT AATCGCCGCT TTATCTTGGA GTATTACCAG TATTCTTGTT
AAAAAAGCAG GAACCAAAGA GATTTTTGCC TTTAGTATCT GGGGCATGTT ATTTGCGCCG
TTACCTTTAT TTGCACTCGC TTTTTTACGC GGTGGACCGG AGCAATTACA AACATTGAAT
TCACTCGCTA ATGGCTCTGT TATTTTCTCT GTGTTATTTC AAGCCTACCC AGTTACGTTA
TTTGGCTATT GGGTTTGGAA TCGCTTATTA GTGAAATACC CATTAAGCAC AGTTGCACCG
TTAACTTTTT TGGTACCCAT TTTTGGTTTA TTAGGCAGTG CTATTTTTTA CCAAGAGCAA
ATAGGGCTTG TCAAAGCACT CGCATGTTTA TTAATTATTG TGGGGTTAAT CATTGGCTTA
ATAAAAACGG AAAAGTTAAA AGCGTATTTA CATCAACCTA AATCAGCGAA ACAAGTGGTT
TAG
 
Protein sequence
MNNRDLLLGI FVMIIWGLNF SVIKLGVSEI DPLLLTALRF SFAVIPAVFF VKRPQVKWRY 
LMGYGLVFAI GVWGMGSWSI QAGLSAGMAS VLLQMNVVIS LLVGYFVLKE TVAPIKVVGS
VVAILGLALS VSVTDGSVTT LGLVFILIAA LSWSITSILV KKAGTKEIFA FSIWGMLFAP
LPLFALAFLR GGPEQLQTLN SLANGSVIFS VLFQAYPVTL FGYWVWNRLL VKYPLSTVAP
LTFLVPIFGL LGSAIFYQEQ IGLVKALACL LIIVGLIIGL IKTEKLKAYL HQPKSAKQVV