| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3373 |
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| Symbol | |
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| ID | 3521290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3502304 |
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| End bp | 3503206 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637285822 |
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| Product | histone deacetylase family protein |
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| Protein accession | YP_270049 |
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| Protein GI | 71280821 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0543734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACAC CACTAGTATT TCACCCTATT TATAGCCAAC TTGAATTACC CATTAGACAT
CGATTTCCAA TAGAAAAATA TGTTGGAATA CGAAATGCAC TTGTCGCAAA TGGAGTTCCT
AATAATTGGT TTAAAAAACC AACTCCTGTT AATCCCGATA ATGTTAAAAC CGTTTATGAT
CCCACCTATA TACATCAGCT GATTAATAAT CAATTAGATT CTAAAGCGAT GCGAAGAATA
GGTTTTCCTT GGTCTCAACA ATTGATTGAA CGAACACTAA CTGCTGTTGG TGGCACTATA
ATGACTGCAC AATTAGCCTT AGAATATGGA AAATCACTAA ATTTAACGGG TGGTTATCAT
CATGCTTTTG CTAATTTTGG CTCTGGGTTT TGCATGATTA ACGATTTATA TTTAGCCGCA
TTAACCATGT TACAAAATGA TAATATCAGC AAGGTACTTA TATTTGATGC TGATGTACAT
CAAGGTGACG GAACAGCAAA GTTAGCATCA AATAATCAGA ATGTTTTTAC GGTTTCAATT
CATGGTGAAA AAAATTTCCC ACACCGTAAA CAAGTTTCAA ATTTAGATTT TGCATTGCCG
AAAGGAACAA CAGACAGTCT TTATTTGGAG ACAGTAGATA ATGCTTTGAA TAAAGCCTTT
TCTAGCTTTA AGCCTGATGC AGTAATTTAC GATGCGGGAG TAGATATTCA TTGCAATGAC
GATCTTGGTC ATCTTGATAT TTCTACTCAA GGTGTTTTAG CTCGTGACAA ACTAGTTTTT
GATTACTGTA AGCTTAAAGG TATACCAATC GCTGCGGTCA TCGGTGGTGG TTACCAAAGA
GATATTGAAG CGTTAGTTAA TGTACACCTA CAACTTTTTG TTGCTGCTGG TGTTATTACA
TAA
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| Protein sequence | MMTPLVFHPI YSQLELPIRH RFPIEKYVGI RNALVANGVP NNWFKKPTPV NPDNVKTVYD
PTYIHQLINN QLDSKAMRRI GFPWSQQLIE RTLTAVGGTI MTAQLALEYG KSLNLTGGYH
HAFANFGSGF CMINDLYLAA LTMLQNDNIS KVLIFDADVH QGDGTAKLAS NNQNVFTVSI
HGEKNFPHRK QVSNLDFALP KGTTDSLYLE TVDNALNKAF SSFKPDAVIY DAGVDIHCND
DLGHLDISTQ GVLARDKLVF DYCKLKGIPI AAVIGGGYQR DIEALVNVHL QLFVAAGVIT
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