| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3372 |
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| Symbol | |
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| ID | 3518397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3500060 |
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| End bp | 3501889 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285821 |
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| Product | putative transporter |
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| Protein accession | YP_270048 |
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| Protein GI | 71278804 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.236753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTATTC CAGACCTACC CAATAACCAC GCATTAGCCG TTTTATTGAT TACCGTATTT
GCGTTGTATT TATTTCGCCG AGAAGATACC CCTTTAGAAA CTTCTTCGTT GGCTGTTATA
ACAATACTGT GTTTACTGTT TGCACTGTTT CCATTTTATG TCGATGGCAA CCATTTCGAA
CCAAGCTCAT TGTTTTTTGG TTTTGGCCAT GAGGCCTTAG TTACCGTTTG CTCATTAATG
ATTATTGGTC ATGGTATTGT CAGTACAGGG GCTTTGGAGC CTATTGGTCG ATATTTGGCT
AAGTTATGGA AAATAAGCCC TAGCTTGTCA TTATTGTTAA CACTTATTCT TGGTGGAGGG
TTAAGTGCCT TTATAAACAA CACACCCGTT GTTGTGCTAT TACTGCCTAT TTTAATCAAT
GTATCTTTAC GCACTCAAAC AGACTCATCA CCCATGTTAC TCCCAATGGG ATTAGCAACC
TTGGTGGGTG GAATGACCAC CACAATAGGC ACCTCAACTA ATTTATTAGT CGTGAGTATT
GCAAAAAATA TGGGGGCAGT TGAATTTGGA CTATTTGACT TTATTCAGCC AGCACTTATT
GCCTCTGTGG TAGCTGTACT TTATTTATGG CTAATTGCGC CTAAACTTTT ACCGAATAGA
ACACCATCAA TGCCTGATAC GTCTCCTCGA TTATTTAGTG CTTATCTTAA TATAAACGAA
GAAAGTGATG TTAACGATAA AACCATTGCC GAAATAATTA AATTGACCGA TGGACAGCTC
AAAATAGAGA GTATTCAACG CGGTCCAGAC TATCGAAATA TCATACCTTT ACCTGATACG
GTACTTGTTA CTGGTGATCG ATTGAAGGTT CACGATTATC CTGATCGCCT TAAAGAATTC
GAGACAGTGT TAGGCGCAAC CTTATTTTCT GGGCTGCATA AAGTTGATGA AGAACATCCA
TTAAATGCTG ACAAACAAAC CTTAGCAGAG ATTGTAATCA TTGCGGGTTC TGGTATCGAA
GGAAAAACCT TACAACAAGC AAATTTCATT CGCAAATATG CTATTTCAGT AGTTGCATTA
CATAGAGCCG GTAAAGCAAT GGAAACGGGG CGAAATAGCA TTGGAAATAC GCGTTTGAAG
ATTGGTGATG TATTACTCGT ACAAGGAGAA ACAGAGCAAA TTGATTTATT AAAAGCTAAA
CAAGGCATGT TAATAATTGA TGGCGCTGAA TCGTTACCTC AAACGAGCAA AGCGCCGGTG
GCATTAGGCA CATTACTCGC CGTCGTTTTA TCTTCAGCGC TGGGGATTTT GCCTATTGAG
ATTAGTTCAG TATGCGGTGT ACTCATATTA TTACTCACTA AATGTTTAAA TTGGGAAGAA
GCCGCATCAG CCTTAAGTAC TCAAGTTATA TTAATTGTTG CCGCGTCACT GGCTTTAGGC
TCCGCGATGA TGACAACAGG AGGCGCTGAA TATATAGCAC AGGTTTTTGT CGCCTTATCG
TATGGACTGC CACCGGGAGG AATTTTATCG GCTTTAATGC TGTTATTAGC CATATTAACC
AATATCGTTT CTAACAATGC GGCTGCGGTT ATTGGCACTC CCATTGCTAT TTCTGTTGCT
AGTCAACTTA ACCTTTCACC CGAGCCATTT ATTTTAGCCG TGCTATTTGG TGCCAACTTA
AGTTACGCAA CACCCATGGC ATATAAAACC AATTTATTGG TGATGAATGC TGGTGGTTAT
CAGTTTTCTG ATTTTATGCG TGTGGGTATT CCGTTGATTT TACTCATGTG GATAACACTT
TCCTTGCTTT TAAATTGGCT ATATTTATAA
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| Protein sequence | MSIPDLPNNH ALAVLLITVF ALYLFRREDT PLETSSLAVI TILCLLFALF PFYVDGNHFE
PSSLFFGFGH EALVTVCSLM IIGHGIVSTG ALEPIGRYLA KLWKISPSLS LLLTLILGGG
LSAFINNTPV VVLLLPILIN VSLRTQTDSS PMLLPMGLAT LVGGMTTTIG TSTNLLVVSI
AKNMGAVEFG LFDFIQPALI ASVVAVLYLW LIAPKLLPNR TPSMPDTSPR LFSAYLNINE
ESDVNDKTIA EIIKLTDGQL KIESIQRGPD YRNIIPLPDT VLVTGDRLKV HDYPDRLKEF
ETVLGATLFS GLHKVDEEHP LNADKQTLAE IVIIAGSGIE GKTLQQANFI RKYAISVVAL
HRAGKAMETG RNSIGNTRLK IGDVLLVQGE TEQIDLLKAK QGMLIIDGAE SLPQTSKAPV
ALGTLLAVVL SSALGILPIE ISSVCGVLIL LLTKCLNWEE AASALSTQVI LIVAASLALG
SAMMTTGGAE YIAQVFVALS YGLPPGGILS ALMLLLAILT NIVSNNAAAV IGTPIAISVA
SQLNLSPEPF ILAVLFGANL SYATPMAYKT NLLVMNAGGY QFSDFMRVGI PLILLMWITL
SLLLNWLYL
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