| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3354 |
|---|
| Symbol | |
|---|
| ID | 3523083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3480846 |
|---|
| End bp | 3482054 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637285803 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_270030 |
|---|
| Protein GI | 71282608 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.787114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAACAG GTAATTATTG GGCGTTTACC TTAACAGATG GCGCGTTACG CATGCTTGTT
GTGCTGTATT TTCATCAGTT AGGTTACAGC CCGTTTAATA TTGCCATGCT GTTTTTATTT
TATGAAATCT TTGGTGTTAT CACTAACCTT ATTGGTGGGT GGTTAGGCGC AAGGCTTGGG
TTAAATAAAA CCATGAATAT TGGTTTAGCC TTGCAGATAA TCGCGCTGGC TATGTTGGCC
GTTCCTGCTG AAATGCTAAC CGTTATCTAT GTCATGGTTG CTCAGGCATT GTCAGGTATT
GCTAAAGATT TGAATAAAAT GAGTGCTAAA AGCTCGATTA AATTACTGGT GCCTGAAGGA
GCAGAAGGTA AACTCTATCA ATGGGTTGCT ATTCTTACTG GCTCTAAAAA CGCCTTAAAA
GGTGTTGGGT TCTTTTTAGG TGGATTATTA CTTACTTTAC TTGAATTCAA CGGTGCAATT
ATTTTAATGG CTTCACTATT AACTATAGTG TGGCTATTTA GTTTATTCGC ATTGAAAGAA
GATTTAGGTA AAGCGAAAAA CAAACCTAAA TTTAAAGATA TTTTCTCTAA AAGTGCGTCA
ATCAACATAC TCTCTGCTGC ACGACTGTTC TTATTTGGCG CGAGAGATGT TTGGTTTGTT
GTCGCATTAC CTGTGTTTTT AGCGGTATCT TTTGATTGGG ACCATTGGGC CGTTAGTGGT
TTTATGGCAA GTTGGATCAT TGGTTACGGT CTCGTTCAAT CTGCTGCGCC CTATATTACA
AACAGAGGTA CAAATAGTGG TACCTCAAAA ACGACAGTTA AGGGCAGGGG AATACAACAA
GGTAACGCTC CTACGGGCAG AGATGCATTC TTATGGGCGA GTTATTTAAC CCTAATACCT
GCGGCTATTG CTTTGGCATT ACATTTCAAT TTTCACGTGC AAGCTTCTCT TATTATCGGA
TTACTCATCT TTGGTGCAGT TTTCGCTATC AATTCTTCCC TACATAGTTA TCTTATCGTT
AGTTATGCTG GAAGTGATGG TGTATCCCTT GATGTTGGTT TTTATTATAT GGCTAATGCC
ATGGGCAGGT TAATAGGTAC CGTGCTGTCA GGTTGGGTAT ATCAAAACTA TGGTTTGGAA
GCCTGTTTGT GGATATCAAG TGTATTTGTT GCAATGGCTA CCTTGCTGTC TCTAAAATTG
AAACAATAG
|
|---|
| Protein sequence | MITGNYWAFT LTDGALRMLV VLYFHQLGYS PFNIAMLFLF YEIFGVITNL IGGWLGARLG
LNKTMNIGLA LQIIALAMLA VPAEMLTVIY VMVAQALSGI AKDLNKMSAK SSIKLLVPEG
AEGKLYQWVA ILTGSKNALK GVGFFLGGLL LTLLEFNGAI ILMASLLTIV WLFSLFALKE
DLGKAKNKPK FKDIFSKSAS INILSAARLF LFGARDVWFV VALPVFLAVS FDWDHWAVSG
FMASWIIGYG LVQSAAPYIT NRGTNSGTSK TTVKGRGIQQ GNAPTGRDAF LWASYLTLIP
AAIALALHFN FHVQASLIIG LLIFGAVFAI NSSLHSYLIV SYAGSDGVSL DVGFYYMANA
MGRLIGTVLS GWVYQNYGLE ACLWISSVFV AMATLLSLKL KQ
|
|---|
| |