| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3347 |
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| Symbol | |
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| ID | 3519324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3474769 |
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| End bp | 3476229 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637285796 |
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| Product | putative osmoregulated proline transporter |
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| Protein accession | YP_270023 |
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| Protein GI | 71279161 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTA TCGATTTAGT AGTGATAGCT GTATATTTTT GTGTGTTAGT GGGCATAGGT
ATTTATGCAG GTAGCAAGGT AAAAAACTCT GAAGATTATA TGGTCGCAGG TCGCTCTTTG
AGCATGCCGG TATTGTTAGG GACTTTAGTT GGCTCAGCCA TAGGAGCGGC AGCAACATTT
GGTAAAGCAG GTAAAGCTTA CGAAGTAGGG TACGCGATAT TAATTGCCAG TGTTGCTTAT
ATTTTAGGTT ATATCGTACT TTGTTTTTTA GCCCCTAAAT TGCAACAGGC TAAAATTGAT
ACCATTCCAG GGGCACTGGA GCGTCGTTAC GGTAAGACCA TGCGCGTTAT TTCTGCCGTA
GTTTTAGTAC TCGCTGTTAT TGCTTTGTTT GGCGCGCAAT TAATTGCTAT TGGTTTAACA
GCCGAAGCAG TATTTTCTGA TTTTGGTATT ACCTTTGAAC ATGCTGTAAT TATCGCTACC
TTGGTGATTG TTATATACAC CTTAGTAGGT GGTTTACTTG CAGTCGCTTA TAACGACTTA
TTTCAAACTA TTATTATGCT CATTGGCGGT GGTTTGTTAC TGCCACTGTT TTTATCCATA
GATTTAGGCG ACCAACTGAG TAGCGCTTTA GTTTCGCCAG CAGTAGATTG GTTAGGTGGT
ATGCACTGGG GTTATGTACT TTCATTTTTC CCTATCTATT TTGCTTTTGT CTTAATTGAC
CCTTCTATTT GGCAACGGGT GGCTGCTTCA AAAAATACCG CTAACTTAAA ACCTGCATTC
TTGGCTACGG CAGCTATTTT TATGTTCTGG AGTTTGGTGG TCGTTACTTT AGGTGTTATT
GCTTTTAATA CCCTACCTGA TCTGGCCCAC CGCGATAGCG TTATTCCTAC TTTGGTCATG
AACCACATGC CACCCTTAGT TAAAGGCATC TGCTTAGCCG CAATAATGGG TATTATTATT
TCTACGGCTG ATTCAGCATT ATTGGTGACG GGCACCACGG TAAGTACCGA TTTATTCAAA
GTACTAAAAC CTGAGATATC AGATAAAAAA CAACTACTTA TTACTCGAAT AACAGTACTG
GTTGTCGGTA TATTCGGTCT TATTTTTGCC CTGCAAAAAA GTAATATTTT TGAAGTGATG
ATGCTTGCAT TAGCTATTTT TGTTTCTGGG TTATTTGTGC CAGTCATGGC TGCTTTGTTC
TATAAAAAAG CAACTAGTAG CGCCGCCTTA ATTTCTGCCA TTACCGGTGC TGTCGTTCAG
TTATCAAGTT TTGCTGCAAA AATGCAAGGT CATTTACCTG AAGGTGTAGA ACCTATTTTA
TTAGCGTTAG TGTCGAGTAG TTTAGCTATG TGGTTTGTGA GTCACTTAAC TTATAACCCA
GCAACGGCGA CGCAACCTTT GTTACGTAAT GTTGATGTTA ACTTACAGAG TAGTTCGTCA
ATACCTGAAC CTGTTAAATA A
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| Protein sequence | MDFIDLVVIA VYFCVLVGIG IYAGSKVKNS EDYMVAGRSL SMPVLLGTLV GSAIGAAATF
GKAGKAYEVG YAILIASVAY ILGYIVLCFL APKLQQAKID TIPGALERRY GKTMRVISAV
VLVLAVIALF GAQLIAIGLT AEAVFSDFGI TFEHAVIIAT LVIVIYTLVG GLLAVAYNDL
FQTIIMLIGG GLLLPLFLSI DLGDQLSSAL VSPAVDWLGG MHWGYVLSFF PIYFAFVLID
PSIWQRVAAS KNTANLKPAF LATAAIFMFW SLVVVTLGVI AFNTLPDLAH RDSVIPTLVM
NHMPPLVKGI CLAAIMGIII STADSALLVT GTTVSTDLFK VLKPEISDKK QLLITRITVL
VVGIFGLIFA LQKSNIFEVM MLALAIFVSG LFVPVMAALF YKKATSSAAL ISAITGAVVQ
LSSFAAKMQG HLPEGVEPIL LALVSSSLAM WFVSHLTYNP ATATQPLLRN VDVNLQSSSS
IPEPVK
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