Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3340 |
Symbol | kefC |
ID | 3521610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3464423 |
End bp | 3466255 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637285789 |
Product | glutathione-regulated potassium-efflux system protein KefC |
Protein accession | YP_270016 |
Protein GI | 71281139 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA TGGCTGTGAT ATATCTCGCC GCGGCAATAA TTGCGGTGCC CATAGCAAAG CGTGTCGGCT TAGGCTCCGT ACTAGGTTAT TTGCTAGCTG GTATTTTGAT TGGACCATTT TTATTGGGGT TAGTAGGCGA TCAAACTGAT GTAATGCATT TTGCCGAGTT CGGTGTTGTG ATGATGCTAT TTTTAGTTGG CCTTGAATTA CAGCCTTCTC GTTTGTGGAA GTTAAGACAT TCCATTATTG GCTTAGGCGG CTTGCAAGTT GTGGTGACAA CCCTATTAAT TTCTGCGGCC TGCTACACCA TTTTGTCACT GGCATGGCAA ACCTCGCTTG CCATAGGCTT AATGTTGGCA CTTTCATCAA CCGCCATTGT TTTGCAGACA TTAAATGAAA AAGGTTGGAT AAAACAAGAA GCGGGTCAAA ACGCCTTTTC AGTCTTACTT TTTCAAGATA TTGCTGTGAT CCCCATTTTG GCATTAGTCC CTTTATTAGC ATTTAGTGAC AACATTAGCG ACTCAGGCTC TCACGGGAAC TTGATTGAAC ATTTTCCGGT GTACATTCAA ACAGCGATAT CAGTCGGTGT GATTGCCGCC ATTATATTGG CTGGTAAGTA TGTTTCAGCA CCTTTATTTC GTTATATCGC CGAGACACGC TTACGAGAGT TGTTTACCGT CTTTGCTTTG TTTCTTGTGA TAGTGATTGC GGTAATCATG CAAAAGATAG GTCTATCACC AGCCCTAGGA ACATTTTTAG CCGGTGTAGT TTTAGCCGAA AGTGAATTTA GACATGAATT GGAAGTAGAT ATTGAACCGT TCAAAGGGCT TTTACTTGGT TTGTTTTTTA TTACTGTCGG TGCATCAATA GACTTTCCAT TATTGTTTGA AGAGCTGGGT TTAGTGACAT TGTTAGTGGT GTCATTAATT GCTATCAAAG CGGCTGTTTT ATTCTTGCTA TCTATTTTAT TCAAAATGGA AAAAAAGCAA AAACTGCTCT TTACACTTGC CTTAGCGCAA GGGGGTGAGT TTGCTTTTGT GCTGCTATCA CTCACCTCTT CCTTACAAAT ACTCACGCCA GAACAAAGTA AAATTACTAC CTTGGTCGTC GCCATTTCTA TGCTGATGGC GCCTGTTTTA TTGATATTCT ATGAAAAAGT ACTCGATAAG GAAGCAGAAA ACGCTAGAGA ATTTGATAAA CCAGAAGATA TTGAAGCAAC AAAAAGCGTT ATCATTGCAG GTTATGGTCG TTTTGGTCAA ATAGTCGGTC GCCTTCTTGG CTCTCAAGGC TATCACTTAT CTATTCTAGA CCACAGTCCA ACGCAAATAG ATCTGCTGAA AAAATTTGGT AATAAAGTCT TTTATGGCGA TGCCGCTCGA AAAGACTTAT TAGAAGCTTC GGGCGCGCAA GAAGCACAAT TATTAGTAAT AGCCATTGAT GATGCCGATA AAATCATTGA AATAGCTCAG CTTGCTCAAA AACATTATCC TAATTTACAA ATTGTCGCCC GCGCGATTGA CCGTCATCAT GCCTATGAAT TAATACGTAT TGGGGTAAAA ACCATTAAAC GAGAAACGTT CGAGTCAGCC TTAGGCTTAG GTGTTTCAGC GCTAGAATTA CTCGGAAATA GCCAAGAAAG TGCTAAACGT GCAGGTCAAT TATTTTCAGA GCATGATAGA GAGTCAATGC ATGTTTTATC TGAAGTATGG GGTGATGATC ATAGTTATGG GGTTGCCGTT AAACAACGTA TGGAACTGCT TAAACAAGTA CTTGTTAGTG ATGAAGAAGA GCAAAGTAAA ATACAGACTT GCCAAAAATC ACCTGAAGCC TAA
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Protein sequence | MLEMAVIYLA AAIIAVPIAK RVGLGSVLGY LLAGILIGPF LLGLVGDQTD VMHFAEFGVV MMLFLVGLEL QPSRLWKLRH SIIGLGGLQV VVTTLLISAA CYTILSLAWQ TSLAIGLMLA LSSTAIVLQT LNEKGWIKQE AGQNAFSVLL FQDIAVIPIL ALVPLLAFSD NISDSGSHGN LIEHFPVYIQ TAISVGVIAA IILAGKYVSA PLFRYIAETR LRELFTVFAL FLVIVIAVIM QKIGLSPALG TFLAGVVLAE SEFRHELEVD IEPFKGLLLG LFFITVGASI DFPLLFEELG LVTLLVVSLI AIKAAVLFLL SILFKMEKKQ KLLFTLALAQ GGEFAFVLLS LTSSLQILTP EQSKITTLVV AISMLMAPVL LIFYEKVLDK EAENAREFDK PEDIEATKSV IIAGYGRFGQ IVGRLLGSQG YHLSILDHSP TQIDLLKKFG NKVFYGDAAR KDLLEASGAQ EAQLLVIAID DADKIIEIAQ LAQKHYPNLQ IVARAIDRHH AYELIRIGVK TIKRETFESA LGLGVSALEL LGNSQESAKR AGQLFSEHDR ESMHVLSEVW GDDHSYGVAV KQRMELLKQV LVSDEEEQSK IQTCQKSPEA
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