Gene CPS_3330 details

Gene Information

• Locus tag: CPS_3330
• Symbol: ohr
• ID: 3521147
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: -
• Start bp: 3450668
• End bp: 3451090
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637285779
• Product: organic hydroperoxide resistance protein
• Protein accession: YP_270006
• Protein GI: 71280679
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1764] Predicted redox protein, regulator of disulfide bond formation
• TIGRFAM ID: [TIGR03561] peroxiredoxin, Ohr subfamily

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.316626
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACGC TATATACAAC AACAGCAACT GCTTCTGCAG GACGTAACGG ACAAGTAAGC 
ACAGATGATA ATATGCTCGA CCTTGCACTA AGTTACCCAA AAGAGATGGG GGGAACGGGC 
GCAGCAACAA ACCCTGAACA GTTATTTGCA GCGGGTTACG CTGCTTGTTT TTCAAATGCC 
ATTTTACATG TAGCGGGAGG GCAAAAATTA AAATTAGCGA CAGCACCTGT CTCTGCAGAA 
GTGGGTATTG GTCCTAATGA AGCGGGTGGT TTTGCATTAA GCGTTTCATT AGCGGTAACG 
TTAGAACTGG ATGATGAGCA AGCAATCGCA TTGGTTAAAA CTGCACATCA AGTCTGCCCA 
TACTCAAATG CCGTTAATGG TAATATTGAT GTGAAACTGA CCGTCAATGG CGCTGCATTA 
TAA 

 

Protein sequence

MTTLYTTTAT ASAGRNGQVS TDDNMLDLAL SYPKEMGGTG AATNPEQLFA AGYAACFSNA 
ILHVAGGQKL KLATAPVSAE VGIGPNEAGG FALSVSLAVT LELDDEQAIA LVKTAHQVCP 
YSNAVNGNID VKLTVNGAAL