| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3328 |
|---|
| Symbol | |
|---|
| ID | 3522204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3449153 |
|---|
| End bp | 3450148 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637285777 |
|---|
| Product | putative catalase |
|---|
| Protein accession | YP_270004 |
|---|
| Protein GI | 71281732 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0753] Catalase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0243326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCATA ACCTCATTAC CCCAGGCCTT ACTGCTTTTA TTCTAATTGC AGGTGCTACA
GCAACTTCTA ATGCCGTAGC TAATGAAAAT AAAATTCAAG CAAATGATTT CGTTGAAATA
TTTGTAAAGC TAGGTGGAAA ACATCCAGGC TATAGAAAGG CACATGCTAA AGGTTTGTGT
GCCTCAGGCA CTTTTTTACC AGCGCCCAAT AAGCACTTCC AAGGTTCAGC ACTGTTGTCC
AACGGTGAAC TGCCCGTATC TATGCGCTTT TCATTAGGTG GTTCTAACCC AACTAGTGAT
GAAAAAGCAC CCGGCACTCG CGGTATGGGT ATGCAAATTG AACTACCTAA TGGCTCTTTA
CATACTTTCA CGGGCAACAA CTTCCCAGTC TTTGCAGGTA AGGATCCAGA AACTTTTCAT
GGCTTTTTAT CAACATTACT TCCTGATGAA AATGGAAAGT CGGACTCTGC CAAAACAATA
GCATTCATTC AGAAGCACCC GAGCGTGCAA GCTAATGCCA TGTGGAATCA AACAGCTAAA
ACACCTGCAT CTTATGCCAA TACAGAGTTT TTTGGCATCC ACACGTTTTA CTTTGAACAA
TCAAATGGGC ATAAAACTAA ATTTCGCTGG AACATTAAGC CGAGCTTAGG TGTAAAGACA
ATGGAAAAAG CAGAGGCGGC TAATAAGCCA ACCGAGTTTT TAGCTGATAC TTTTGCTCAA
CAACTTAAAA ACGAAACTGT TCGTTTTACA ATTATGGCAA GCTTAGGTGA AGCTGAAGAT
AGCGATATTG ACCCATCACA ACAGTGGCCT AGTGAACGTC CTCAAGTAGC TCTTGGAACA
GTGACGGTTA AAACTAGTGG TGGGGATGCA TGCAAAAATA CTAACTTTGA TCCTAATATT
ATGTCCGCTG GTTTTATGCC AAGCGCAGAT CCAGTTTTAA AAATACGATC ACAAGCTTAT
GCTATATCTT TTGGCAAAAG ATTGAGCGGT CAATAA
|
|---|
| Protein sequence | MIHNLITPGL TAFILIAGAT ATSNAVANEN KIQANDFVEI FVKLGGKHPG YRKAHAKGLC
ASGTFLPAPN KHFQGSALLS NGELPVSMRF SLGGSNPTSD EKAPGTRGMG MQIELPNGSL
HTFTGNNFPV FAGKDPETFH GFLSTLLPDE NGKSDSAKTI AFIQKHPSVQ ANAMWNQTAK
TPASYANTEF FGIHTFYFEQ SNGHKTKFRW NIKPSLGVKT MEKAEAANKP TEFLADTFAQ
QLKNETVRFT IMASLGEAED SDIDPSQQWP SERPQVALGT VTVKTSGGDA CKNTNFDPNI
MSAGFMPSAD PVLKIRSQAY AISFGKRLSG Q
|
|---|
| |