Gene CPS_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3314 
Symbol 
ID3522434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3437188 
End bp3438066 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content42% 
IMG OID637285763 
Productputative nitrate ABC transporter, ATP-binding protein 
Protein accessionYP_269990 
Protein GI71281962 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID[TIGR01184] nitrate transport ATP-binding subunits C and D 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.662783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAT CAGCTTTAGA AAAAAACACG CCACCAGCCT TTTTAAATAT CAGCCAAATA 
GACATGGTTT TCCCGACAGA TACTGGCGGC TTTACCGCGT TAAAAGGTGT TGACCTAAAA
ATTGATAAAG GTGAGTTTAT CTCGCTTATT GGTCACTCTG GCTGTGGTAA ATCAACGGTG
CTTAATATAG TCGCCGGTCT TTATCAAGCC ACAAAAGGTG GTGTGTTACT GCAAAATAAA
GAAGTGAATG AACCGGGTCC TGAGCGCGCG GTGGTGTTTC AAAACCACTC ATTATTGCCT
TGGTTAACGT CCTATCAAAA TGTTGAGTTA GCGGTAAGAC AAGTTTTCAA AAAGACTATG
TCAAAGGGAG AGATGAAAGA GTGGATTGAA TACAACTTAA AACTTGTACA TATGGACCAC
GCTATGCATA AACGGCCAGA TGAAATATCG GGTGGTATGA AACAGCGGGT TGGTATTGCA
CGTGCCTTGG CGATGCAACC GGAAGTTTTA TTAATGGATG AGCCCTTTGG CGCCCTTGAC
GCCTTAACCC GAGCACATAT GCAAGACTCG CTCATGGAAA TTCAAAACGA ATTGAACAAC
ACCGTGATAA TGATCACCCA TGATGTTGAT GAAGCGGTCT TACTTTCTGA TCGCATCGTG
ATGATGACTA ATGGGCCAGA AGCAACTGTG GGCGAAATTC TCGATGTTAA ACTCGAGCGA
CCACGCAGTC GATTATCCCT TGCCAAAGAT ATTGAATATA ACCGACTTCG CTCTGAAGTA
TTAACCTTCC TCTATGAGAA ACAAAGAAAG GTAGAAAACA TAAGCAGTAA AACTGTGGCG
CCAAAGGTAA TCCCAAGAAA ACGTGCTAAC GAAAAATAA
 
Protein sequence
MNSSALEKNT PPAFLNISQI DMVFPTDTGG FTALKGVDLK IDKGEFISLI GHSGCGKSTV 
LNIVAGLYQA TKGGVLLQNK EVNEPGPERA VVFQNHSLLP WLTSYQNVEL AVRQVFKKTM
SKGEMKEWIE YNLKLVHMDH AMHKRPDEIS GGMKQRVGIA RALAMQPEVL LMDEPFGALD
ALTRAHMQDS LMEIQNELNN TVIMITHDVD EAVLLSDRIV MMTNGPEATV GEILDVKLER
PRSRLSLAKD IEYNRLRSEV LTFLYEKQRK VENISSKTVA PKVIPRKRAN EK