Gene CPS_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3293 
Symbol 
ID3518828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3417237 
End bp3417776 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content34% 
IMG OID637285742 
Producthypothetical protein 
Protein accessionYP_269969 
Protein GI71278572 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.222647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCAA AATTTGAAAA TACAGAGCTT AAATCCCCGA AATTAAAGTA TTTATCTGCT 
TATTCTGCAC AAATACAACT GCAAGTTCAG CAAATGATCG AACAAAAAAA TTTAGAGAAA
TATTTATTAA ACAAATACCC AACGACCCAT GAGGTAAGTA ACGACAAAGC CCTACGTGGT
TATGTTATGT CACTCAAGAA TCAGTATTTG AAAAAAGCAT CGCCTTTAAG TCAGATAAAG
TATGACGATA AAATTCATAT CATTAATAAT GCTTTAGGGT TGCATACCTA TGTCTCTCGT
GTACAAGGTA ATAAGCTAAA AAGTAAACAT GAAATTCGCA TAGGCAGCCT ATTTAAAAAG
GCCCCTGAGG CTTTCTTAGC TATGATAGTC GTTCATGAGT TAGCTCATCT AAAAGAGAAA
GAACATAACA GAGCCTTTTA TAAGCTATGC CAAAGCATGT TGCCTGATTA TCATCAATTA
GAGTTGGACT TACGTATTTA CCTTACTCAC GTAGAGTTAA TTGGCGATAT TTACGCTTAA
 
Protein sequence
MSSKFENTEL KSPKLKYLSA YSAQIQLQVQ QMIEQKNLEK YLLNKYPTTH EVSNDKALRG 
YVMSLKNQYL KKASPLSQIK YDDKIHIINN ALGLHTYVSR VQGNKLKSKH EIRIGSLFKK
APEAFLAMIV VHELAHLKEK EHNRAFYKLC QSMLPDYHQL ELDLRIYLTH VELIGDIYA