Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3293 |
Symbol | |
ID | 3518828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3417237 |
End bp | 3417776 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637285742 |
Product | hypothetical protein |
Protein accession | YP_269969 |
Protein GI | 71278572 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.222647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCAA AATTTGAAAA TACAGAGCTT AAATCCCCGA AATTAAAGTA TTTATCTGCT TATTCTGCAC AAATACAACT GCAAGTTCAG CAAATGATCG AACAAAAAAA TTTAGAGAAA TATTTATTAA ACAAATACCC AACGACCCAT GAGGTAAGTA ACGACAAAGC CCTACGTGGT TATGTTATGT CACTCAAGAA TCAGTATTTG AAAAAAGCAT CGCCTTTAAG TCAGATAAAG TATGACGATA AAATTCATAT CATTAATAAT GCTTTAGGGT TGCATACCTA TGTCTCTCGT GTACAAGGTA ATAAGCTAAA AAGTAAACAT GAAATTCGCA TAGGCAGCCT ATTTAAAAAG GCCCCTGAGG CTTTCTTAGC TATGATAGTC GTTCATGAGT TAGCTCATCT AAAAGAGAAA GAACATAACA GAGCCTTTTA TAAGCTATGC CAAAGCATGT TGCCTGATTA TCATCAATTA GAGTTGGACT TACGTATTTA CCTTACTCAC GTAGAGTTAA TTGGCGATAT TTACGCTTAA
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Protein sequence | MSSKFENTEL KSPKLKYLSA YSAQIQLQVQ QMIEQKNLEK YLLNKYPTTH EVSNDKALRG YVMSLKNQYL KKASPLSQIK YDDKIHIINN ALGLHTYVSR VQGNKLKSKH EIRIGSLFKK APEAFLAMIV VHELAHLKEK EHNRAFYKLC QSMLPDYHQL ELDLRIYLTH VELIGDIYA
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