| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3248 |
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| Symbol | |
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| ID | 3519789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3380001 |
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| End bp | 3380681 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637285697 |
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| Product | putative polysaccharide biosynthesis glycosyltransferase |
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| Protein accession | YP_269938 |
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| Protein GI | 71279334 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.286215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTATTC AAATTTTACA ACACGTTAAA AATAACGCTG TATTTACTGG TACTCATAAA
ACCATTGATA AAAATTATAA ACATAAAGGG ATCCCAGTTA TCTTGCAACA AACGGTTGCA
TTGATTACGT TACTATTGAT AAGCCCATTA CTTTTATTAG CGCTCATTTT GATCAAAGTT
GAAAGTTCAG GTAGTGCTTT ATTCTCTCAA ACAAGAGTGG GTGAAAATGG TCGGCATTTC
AAAATGTATA AATTCCGTTC TATGTATTTA AAAACAGATC CTAATTATAA AGAGCCGGAT
CCAACACAAA GCTCTCGTGA AGGGGTGTGT AAAAAGTATA TTAATGACCC TAGAATTACC
AAGATTGGCC AATTTATCAG AAAATATTCG ATAGATGAGA TCCCACAGTT ATTTAATATT
GTTAGAGGGG ATATGTGTTT GGTTGGACCT AGACCTGCAT TATCTATTGA AACTTATGAG
TATGATAATA ACGATCAAAC AAGATTGTTT ACCAAACCTG GTCTAACGGG GTTATGGCAA
GTATCTGGCC GCGCAGATAC TAATTTTGAA GAGCAGTTAC AGTTAGACAA AACGTATATT
AAACAGCAGA GTTTTTTAAT GGATTGTAAA ATAATAGCGC TCACCATTCC TGCAGTATTA
AGTGCAAAAG GTGCTTATTA A
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| Protein sequence | MAIQILQHVK NNAVFTGTHK TIDKNYKHKG IPVILQQTVA LITLLLISPL LLLALILIKV
ESSGSALFSQ TRVGENGRHF KMYKFRSMYL KTDPNYKEPD PTQSSREGVC KKYINDPRIT
KIGQFIRKYS IDEIPQLFNI VRGDMCLVGP RPALSIETYE YDNNDQTRLF TKPGLTGLWQ
VSGRADTNFE EQLQLDKTYI KQQSFLMDCK IIALTIPAVL SAKGAY
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