| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3245 |
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| Symbol | |
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| ID | 3518970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3375927 |
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| End bp | 3377393 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637285694 |
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| Product | sigma 54-dependent DNA-binding response regulator |
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| Protein accession | YP_269935 |
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| Protein GI | 71278402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.482559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAACT TAAATAAATC TAGAATTTTA TTTGTAGATG ATGAACCAGA AATTCTGCGT
TCTCTCGAAC GTATAACAAA AAAATTGGAT GCCGTTATTT TAACTGCTTC TAGTGGACAA
GACGCACTTG ATCTTATTAA TGAGTGTCCT GTAGATGTCA TCGTGTCTGA TTTTAATATG
CCAAATATGG ATGGTAATCA ATTACTGGAA CAGGTTGCTA AAATTTCACC AGAAACAGTT
CGTATGGTAC TGACAGGCCA TGGTGATATG GAAATGATCG TCAATTTGAT TAACAATGGC
CATATCTGGG GCTTTCTTCA AAAGCCTTGG GATAACTTCG ATCTTATAAT TAAGTTACAA
CAAGCCTTGC AATTACAACA GGTTTTGGCC GAACGAACGT TAATGCGAAG AACAATTGAT
CAATACCAAA AATATCATAA ATCTAGTTTT GAAGGTTTCA TCGGTGATTC AGTGGCTATG
CAATTTGTAT ATTCATGTAT CGAACAAAGC GCACCTAGTA ACGCTTCTGT CTTTATTACA
GGACCAAGTG GTGCAGGTAA AGAAGTTGCG GCACAAGCTA TTCATCACTT AAGCAAAAAG
AAAAATGGGC CCTTTATTGC GCTTAATTGT GCGGCTATTC CGTCAGAATT AATGGAGTCG
GAAATTTTTG GTCATATTAA AGGCGCATTC TCAGGGGCTG TTTCTAACCG AGATGGAGCG
GCCTCTCTGG CAAATGGTGG TAGTCTTTTT CTTGATGAAA TAGGTGAAAT GGATATTAGT
TTACAAGCAA AACTATTACG GTTTATTCAA ACCGGTTGTT TTCAAAAAGT TGGTAGTGGA
AAAGAAGAGA AAGTAGATAT TCGTTTTATT AGTGCGACCA ATAGAGAGCC ACAAATTGCC
ATTGCCGAAC ATAAATTACG TGAAGATCTC TTTTATCGGT TAAATGTTAT TTCAATAGAT
TTGCCGGCGT TAAATGAACG AGATAATGAT ATTCTTAAAT TAGCTGAACA TTTTTTAAGA
CACTTTAGTG ACATTGAGGG TAAGGTATTT GCTGGATTCT CTTCTGGTGC AGAGGCATTA
ATAAAGTCTT ATTCATGGCC GGGTAATGTT CGCCAGTTAC AAAATATTAT TCATAGTTCA
ACCGTTATGT CTGAAGGACC ACTAATTTCT GAAAAGATTA TTGCTCAACA ACTGGGTAGA
CAAAACAAAC AAGCAGAGCC AACGTCTAAT ACTAATAAAC AAAGCGACAT CCCTTCAATA
AATCAGCAAA ATCAAAATAC GAGTGTTCAT CAGGGGAATC ATTCGACCTC ATCAATTATT
ACCTTGGCTG AAGTTGAAAA ACAAGCCATT GAAAAGGCCA TAGACTCGTG CCAAGACAAT
ATTGTAAAAG CTGCGAGTGA ATTGGGCGTA AGTCCATCAA CACTCTATCG AAAAATCCAG
CAATGGCAAA CATCGCCAGC AGAATAA
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| Protein sequence | MQNLNKSRIL FVDDEPEILR SLERITKKLD AVILTASSGQ DALDLINECP VDVIVSDFNM
PNMDGNQLLE QVAKISPETV RMVLTGHGDM EMIVNLINNG HIWGFLQKPW DNFDLIIKLQ
QALQLQQVLA ERTLMRRTID QYQKYHKSSF EGFIGDSVAM QFVYSCIEQS APSNASVFIT
GPSGAGKEVA AQAIHHLSKK KNGPFIALNC AAIPSELMES EIFGHIKGAF SGAVSNRDGA
ASLANGGSLF LDEIGEMDIS LQAKLLRFIQ TGCFQKVGSG KEEKVDIRFI SATNREPQIA
IAEHKLREDL FYRLNVISID LPALNERDND ILKLAEHFLR HFSDIEGKVF AGFSSGAEAL
IKSYSWPGNV RQLQNIIHSS TVMSEGPLIS EKIIAQQLGR QNKQAEPTSN TNKQSDIPSI
NQQNQNTSVH QGNHSTSSII TLAEVEKQAI EKAIDSCQDN IVKAASELGV SPSTLYRKIQ
QWQTSPAE
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