| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3243 |
|---|
| Symbol | |
|---|
| ID | 3523335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3373461 |
|---|
| End bp | 3374474 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637285692 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_269933 |
|---|
| Protein GI | 71277831 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0174671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCTA AATCAATTCC GGTAGTATCG GTCGTTATTC CAATGTATAA CGTAGAAAAA
TATATAGAGC AAAGTATTAA TAGTGTCCTT AATCAGAGTT ACCATCATTT TGAACTTATT
TTGGTTGATG ATGGCTGTGT TGATAATACC TTGGACATAG TTAATACCTT TACTGATCCA
CGTATTAAGA TTGTACGACA AGTTAACCGA GGTTTGTCGG GTGCTCGAAA TACAGGTATA
GAGTCCGCCA GAGGAATATA TATTGCTTTA TTGGATGCAG ATGATTATTG GGCAACTGAT
AAATTAGCTA AGCACATACA ACATTTAAGT ATGAATCCAA AAGTAGGTGT TAGCTATTGC
CCTTCATTAT TCATTGATGA GGAAGGTGCT CTTTTAGGTG TTGGCCAATT CCCTAAACTT
AAGAATATCA CTAAACAGCA TATCTTTTGT CGAAACCCAG TAGGCAATGG TTCTTCACCT
GTCATTAGAA GAGCAGTATT GTCAGAAATT GGCCGTTTCG GTATTAATAA AGATAAATAC
CGAAAAATGT ATTTTGATGA AAGCTTAAGA CAATCAGAAG ATATTGAACT TTGGACACGT
ATAGCGTTAA ACACAAAATG GCAGTTTGAA GGCGTTAGCA CACCGTTAAC TTATTACCGT
GTTAACGATT CAGGTCTGTC TGCCGATGTA GATAAACAAT TTGCAAGTTG GCAACACGCT
GTCATGTTAA ACCAAGCATC TCATTCAACT TTCTTCAAAC AATTTTACAG CTTGGCAAAA
GCTTATCAGT TAAGGTATTT AGCAAGAAGA GCCATACAAT CAAAGAGTAA GGTCACTGCA
TTTAAACTTA TTCATCAAGC AATATACTGT AACTATAGAA TTATTCTGCA GGAGCCTAGT
CGTACTTTCA TGACTTTGTG TTGCGCTTGG TTAAAGTTTT TACCAAGTAA GCTATACAGT
CGTATAGAGA AATTTGCCAT GTTGAATTTT GGTAACAGCT CAGTTAAGCA GTAA
|
|---|
| Protein sequence | MEAKSIPVVS VVIPMYNVEK YIEQSINSVL NQSYHHFELI LVDDGCVDNT LDIVNTFTDP
RIKIVRQVNR GLSGARNTGI ESARGIYIAL LDADDYWATD KLAKHIQHLS MNPKVGVSYC
PSLFIDEEGA LLGVGQFPKL KNITKQHIFC RNPVGNGSSP VIRRAVLSEI GRFGINKDKY
RKMYFDESLR QSEDIELWTR IALNTKWQFE GVSTPLTYYR VNDSGLSADV DKQFASWQHA
VMLNQASHST FFKQFYSLAK AYQLRYLARR AIQSKSKVTA FKLIHQAIYC NYRIILQEPS
RTFMTLCCAW LKFLPSKLYS RIEKFAMLNF GNSSVKQ
|
|---|
| |