Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3195 |
Symbol | |
ID | 3518813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3325373 |
End bp | 3326806 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637285644 |
Product | hypothetical protein |
Protein accession | YP_269891 |
Protein GI | 71278596 |
COG category | [S] Function unknown |
COG ID | [COG3249] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAGAT TTCCTTTTGT AATAATTATG CTGGTATTCT CGTTGCTTAG CCCTAGTCTA GCAGCCCTTG AAGTCAATGA TCTGTACCAA GCCAATGTCG TCGTCGACTC ACAAGCTCGT GAGCAACGTC AACAAGCAAT AAAAAAAGCA CTGCAAGGTG TGTTTTTAAA AGTCGGTGGT AAAAAAGGTG TGTTAACACA TGATGTGTTG AAAAAAGCAC AAAGAAAAGC CAGTAGTTAC GTTAGTCAAT ATCACTACCA ACGAAAAGAT GAAGAGCTGA GTTTGGTCGT TAGCTTTAAT GAAGACAAAG TAAATCAATT GTTTAAAGAC GCGAATCTTC CGTTATGGGG CAGCTTACGC CCACAAGTAC TGTTGTGGTT AATTGATGAG CAAGGCACAA GCCGAAGTAT AGTAGCTTCT GATGAAGATA CTATTATCCC TTCAAGTATC AATGACTTTT CAATACAACG TGGTTTACCT ATTGTTATGC CTTTAATGGA CTTAACCGAT AACGAACAAG TGGTGTTAAG TGATTTTTGG GGGTATTTTC CTGAGCAAAT CCTACAAGCT TCGCAGCGTT ATTTTGCAGA TACTATTGTG GTCATGAGAG TATCAGATTC AAGCTTAGTT ATTGATAGCG AAAAAAATGA AACAGCTATT ACGGAAAGTG ATGCTGCGTG TGGCTTGTTA TGTGAACAGC AAGAACTTGC TCTCCCTAAA GTATTAGATT GGCGTGTTTT CACTCAAGGT GTTCTTTATA CCCAACAATA TCAGGGTATT GATAAAGTCA GTTTAATTGA ACAAGGCTTA TCCGACATTA CCGAGTTAAT TTATCAATCT TATGCATTAT CTACCACAGC GGAAAATGAC TTTGTTATTG AAGTTAAAAA TGTCACATCA TTGAAAAGTG ACATGCAATT ATTTGATTTT TTAAAAGATT TGTCTGCAGT TAAAGCCGTC ACTTTAATTA ATGCTCAAGG TGATGAACGT CAATTCAAGT TAGATCTCAT TGGTTCAAAA GCATCATTTT TAGCCTCATT GAAGCTAAAC AATAAGTTAA CGCAACAACT TGACAGTCAA CTCGATGGCT TTTCTCATAT TCAACAATTT AATACTCAGC TATTCAATGG CCAAGATCAA GCAGGCATAG ACCTCAATAA CGAGGCTAAT GATCAAGTAC AGGTTACTGT TTTAGGCACT GTTGATACGA ATAAAGATGA ACTTAAAAAC CCACAAACGA ATGTAAAAAA TAAAGAAGGT CTCCTAGATA GCAATATCCC AGAGACTATC CCTACGGGAG AGGATAACAG TAATTTAAAT ACTGACTCTG CCGATGAACT TACCAAGAAT GATCAATTGC AAATATTAAC TGAAGCAAAA CCACCACTGA CGATTGTACC CAAAATTCCC GTTTTTTATT GGGAGCAAAG ATGA
|
Protein sequence | MFRFPFVIIM LVFSLLSPSL AALEVNDLYQ ANVVVDSQAR EQRQQAIKKA LQGVFLKVGG KKGVLTHDVL KKAQRKASSY VSQYHYQRKD EELSLVVSFN EDKVNQLFKD ANLPLWGSLR PQVLLWLIDE QGTSRSIVAS DEDTIIPSSI NDFSIQRGLP IVMPLMDLTD NEQVVLSDFW GYFPEQILQA SQRYFADTIV VMRVSDSSLV IDSEKNETAI TESDAACGLL CEQQELALPK VLDWRVFTQG VLYTQQYQGI DKVSLIEQGL SDITELIYQS YALSTTAEND FVIEVKNVTS LKSDMQLFDF LKDLSAVKAV TLINAQGDER QFKLDLIGSK ASFLASLKLN NKLTQQLDSQ LDGFSHIQQF NTQLFNGQDQ AGIDLNNEAN DQVQVTVLGT VDTNKDELKN PQTNVKNKEG LLDSNIPETI PTGEDNSNLN TDSADELTKN DQLQILTEAK PPLTIVPKIP VFYWEQR
|
| |