Gene CPS_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3182 
Symbol 
ID3522157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp3314892 
End bp3316061 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content38% 
IMG OID637285631 
Productputative lipoprotein 
Protein accessionYP_269878 
Protein GI71281685 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0809995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTGTA GAGCATTTTA TTTATCACTG TTAGCCTTGT CGATCACAGC TTGTGGTTCT 
GTTAATAACA AGCAAGCAGA TGGTGGTTTT GATTATCAGC ACAAGCTTGA AGCTAACGAT
CTCGTGATTC CTGCTAATTT GAGTAAACCA AAGCAAGCGA ATGATTTTTT TGTTACCAAT
AAAATAAATC ACCAAGGTCC TGTTGGTGAA GACATGGATA TTAGAGCACC TTCATTGGTG
ATGCCTGTTG CTGCATCTTC ACGTGTTGTT GAAGAGTCTG GTATCGCTAT TATTTGGTTT
GATAAAGTTT TAGAAGATAA AGATTTATTG GCGTTTATTG AAAAGGTTGT CATAGAAAAA
TTAGCAGAAG ATCAAATTAC CTATGACTAC ATTGAAGAAG ACACTGAAGT AACCTTAAGC
AAGGTTACTG AAGGAGCAAC TAGTTTAAAA GAAACTAGCA TTAAGAGAGA AGGTATTAAA
ACGGCCATTA TTGAGTCCGA TTGGTATCAC AACGAAGTTG ATGTTGGTTG GATCTTCACA
GATATTCAGT TTTCAAAAAG CGTACGTTTT CGTTTTCAAT TGTTAGCTAA GTCTCATGGT
CGCAGTGTTT CATTACGCGT TTCATTAGTC GACTTTTTAC AAACAGATGA AAAGGGCGGC
AGTAAAACAA TGGATCCAAT TGATAAGCAA AGAGCTGAAA AAGCTATGCT TAATGAGCTC
ATTGCTGCGG TTGATTATAA CTATCGTCTT CAACAACGTG CGGATCGCTT AACTCGTGCG
AATCAAAAAT TAGTGACCAT AGGTAAAAAC ATTGAAGCGG AACAAGCGTA TATTGTTGAG
ATGGGCTTAG AAGACCTATG GGGTAATATG CCATTGTTCT TTGAAAAACA TGGCTTTACG
ATTACCGATT TAAATGAAGA TAAAAAGATT TATTATGTAG AGTTTGTTAA ACCTGAGTCG
AGTGTTTGGG ATAGCATCTG GGGTGATGAT GTACCCGTCA TTGATGTTAG TGATGCTCAG
TACCAATTTG TGTTAGGAGC TATAGATGAG CTTAACCAGA AAACCTCGGT AACTATCTAT
AATTCTGATG GTGAGCCATT GACCTTAGAA GCGCTTGAGC GAATTTTCCC AGTGGTAGAG
AAGGGACTAT CGTTTAGAGA TGTATTCTAA
 
Protein sequence
MSCRAFYLSL LALSITACGS VNNKQADGGF DYQHKLEAND LVIPANLSKP KQANDFFVTN 
KINHQGPVGE DMDIRAPSLV MPVAASSRVV EESGIAIIWF DKVLEDKDLL AFIEKVVIEK
LAEDQITYDY IEEDTEVTLS KVTEGATSLK ETSIKREGIK TAIIESDWYH NEVDVGWIFT
DIQFSKSVRF RFQLLAKSHG RSVSLRVSLV DFLQTDEKGG SKTMDPIDKQ RAEKAMLNEL
IAAVDYNYRL QQRADRLTRA NQKLVTIGKN IEAEQAYIVE MGLEDLWGNM PLFFEKHGFT
ITDLNEDKKI YYVEFVKPES SVWDSIWGDD VPVIDVSDAQ YQFVLGAIDE LNQKTSVTIY
NSDGEPLTLE ALERIFPVVE KGLSFRDVF