Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3182 |
Symbol | |
ID | 3522157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3314892 |
End bp | 3316061 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285631 |
Product | putative lipoprotein |
Protein accession | YP_269878 |
Protein GI | 71281685 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0809995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGTA GAGCATTTTA TTTATCACTG TTAGCCTTGT CGATCACAGC TTGTGGTTCT GTTAATAACA AGCAAGCAGA TGGTGGTTTT GATTATCAGC ACAAGCTTGA AGCTAACGAT CTCGTGATTC CTGCTAATTT GAGTAAACCA AAGCAAGCGA ATGATTTTTT TGTTACCAAT AAAATAAATC ACCAAGGTCC TGTTGGTGAA GACATGGATA TTAGAGCACC TTCATTGGTG ATGCCTGTTG CTGCATCTTC ACGTGTTGTT GAAGAGTCTG GTATCGCTAT TATTTGGTTT GATAAAGTTT TAGAAGATAA AGATTTATTG GCGTTTATTG AAAAGGTTGT CATAGAAAAA TTAGCAGAAG ATCAAATTAC CTATGACTAC ATTGAAGAAG ACACTGAAGT AACCTTAAGC AAGGTTACTG AAGGAGCAAC TAGTTTAAAA GAAACTAGCA TTAAGAGAGA AGGTATTAAA ACGGCCATTA TTGAGTCCGA TTGGTATCAC AACGAAGTTG ATGTTGGTTG GATCTTCACA GATATTCAGT TTTCAAAAAG CGTACGTTTT CGTTTTCAAT TGTTAGCTAA GTCTCATGGT CGCAGTGTTT CATTACGCGT TTCATTAGTC GACTTTTTAC AAACAGATGA AAAGGGCGGC AGTAAAACAA TGGATCCAAT TGATAAGCAA AGAGCTGAAA AAGCTATGCT TAATGAGCTC ATTGCTGCGG TTGATTATAA CTATCGTCTT CAACAACGTG CGGATCGCTT AACTCGTGCG AATCAAAAAT TAGTGACCAT AGGTAAAAAC ATTGAAGCGG AACAAGCGTA TATTGTTGAG ATGGGCTTAG AAGACCTATG GGGTAATATG CCATTGTTCT TTGAAAAACA TGGCTTTACG ATTACCGATT TAAATGAAGA TAAAAAGATT TATTATGTAG AGTTTGTTAA ACCTGAGTCG AGTGTTTGGG ATAGCATCTG GGGTGATGAT GTACCCGTCA TTGATGTTAG TGATGCTCAG TACCAATTTG TGTTAGGAGC TATAGATGAG CTTAACCAGA AAACCTCGGT AACTATCTAT AATTCTGATG GTGAGCCATT GACCTTAGAA GCGCTTGAGC GAATTTTCCC AGTGGTAGAG AAGGGACTAT CGTTTAGAGA TGTATTCTAA
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Protein sequence | MSCRAFYLSL LALSITACGS VNNKQADGGF DYQHKLEAND LVIPANLSKP KQANDFFVTN KINHQGPVGE DMDIRAPSLV MPVAASSRVV EESGIAIIWF DKVLEDKDLL AFIEKVVIEK LAEDQITYDY IEEDTEVTLS KVTEGATSLK ETSIKREGIK TAIIESDWYH NEVDVGWIFT DIQFSKSVRF RFQLLAKSHG RSVSLRVSLV DFLQTDEKGG SKTMDPIDKQ RAEKAMLNEL IAAVDYNYRL QQRADRLTRA NQKLVTIGKN IEAEQAYIVE MGLEDLWGNM PLFFEKHGFT ITDLNEDKKI YYVEFVKPES SVWDSIWGDD VPVIDVSDAQ YQFVLGAIDE LNQKTSVTIY NSDGEPLTLE ALERIFPVVE KGLSFRDVF
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