Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3174 |
Symbol | rrmA |
ID | 3518677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 3306578 |
End bp | 3307411 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637285623 |
Product | 23S rRNA methyltransferase A |
Protein accession | YP_269870 |
Protein GI | 71277877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACTG ACATCTCTAC TAAAGAAATA GCTCAATACC GTTGTCCTTT GTGCCAACAA GCTTTATTGC TCAATGAAAA GAGCTATCGT TGTGAAAACA ATCATAGTTT TGATCAAGCA AAACAAGGCT ATGTTAATTT ATTACCCGTT CAATTTAAGC ACTCAAAAGA ACCTGGTGAT AACAAAGCAA TGGTACAAGC TAGACGAGCG TTTCTAGACA AAGGTTATTA TCAGCCTTTG TTAGACAGTA TGCTCGCGTT ATATCAAAAA TACAGTGATA AAAATGCAGA CATTTTTGAT GCTGGCTGCG GTGAGGGTTT TTATACCAAT CAGCATAAAA CTGAGCATAA CAGTGTCTAC GGTGTAGATA TTGCTAAAGA AACAATAAAG ATTGCAGCAA AACGTTATCA AGAGTGCTTT TTTAGCGTAG CTACCCTCTC TGATTTACCT TACGCTAATG AGAAATTTGG TTGGATTTAT AGTGTTTATG CGCCAATTTT AGAAAATGAG TTTACTCGGA TTTTGAAAAA TGAAGGGTAC TTTTTAACAG TTACCCCTGC CGACAATCAT TTATTTGAGC TTAAATCGCT GATATACCGT CAAGCAAATA AACATGATAC GACTAAGAAA ATCATTGAAA AATTAACGTT AGTTGAAGAG CAACGATTAA ATTACCCGAT GAACTTCTCT AATAGTGACG ACGTACTGAA CTTATTAGCA ATGACACCTT TTGCCTTTAA AGCCAATGAT GAATTAATTG CTCAATTGAC ACAACAAAAG CACTTCAGCT GCCAAGCAGA CTTTGTTTTA CGTTTGTATC AAAAGAAGCA TTAG
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Protein sequence | MHTDISTKEI AQYRCPLCQQ ALLLNEKSYR CENNHSFDQA KQGYVNLLPV QFKHSKEPGD NKAMVQARRA FLDKGYYQPL LDSMLALYQK YSDKNADIFD AGCGEGFYTN QHKTEHNSVY GVDIAKETIK IAAKRYQECF FSVATLSDLP YANEKFGWIY SVYAPILENE FTRILKNEGY FLTVTPADNH LFELKSLIYR QANKHDTTKK IIEKLTLVEE QRLNYPMNFS NSDDVLNLLA MTPFAFKAND ELIAQLTQQK HFSCQADFVL RLYQKKH
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