| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3157 |
|---|
| Symbol | fadI |
|---|
| ID | 3520938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 3287920 |
|---|
| End bp | 3289227 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637285607 |
|---|
| Product | 3-ketoacyl-CoA thiolase |
|---|
| Protein accession | YP_269854 |
|---|
| Protein GI | 71280472 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA AAAGACTAAC AACTTCGACG GGTGAGCGCA TAGCAATTGT TGCTGGCTTG
CGTACTCCGT TTGCTAAACA GGCAACGGCT TTTCATGGTG TACCAGCAGT TGATTTGGGC
AAAATCGTTG TTAATGAATT ATTACAAAAA CACGATGTTG ACCCAGGGAT CATTGATCAA
CTTGTTTTTG GTCAAGTAGT TCAAATGCCG GAAGCGCCAA ACATTGCTCG TGAAATCGTC
TTGGGTACCG GTATGAATAC TCGTACTGAT GCTTACAGTG TCTCGCGCGC CTGTGCTACT
AGTTTTCAAT CAACGGTTAA CGTTGCTGAA TCTATTATGG CTGGGCACGT TGATGTTGGT
ATTGCTGGCG GTGCTGATTC ATCATCAGTG GCACCTATAG GTGTTTCTAA AAAGCTTGCA
CGCACGTTAG TTGATTTAAC CAAAGCAAGA TCACTAGGGC AGAGACTTTC ACTACTTAGT
CGTCTTGGTT TGAAAGATTT ATTACCCGTT TCTCCAGCTG TCGCTGAATA CTCTACCGGT
ATTTCTATGG GACAAACGGC AGAGCAAATG GCGAAAACTT ATCAAATTTC TCGTCAAGAT
CAAGATGCAT TAGCCCACAG ATCGCACACT TTAGCGACCA AGAGTTGGCA AGAAGGTAAA
TTAGCAGGTG AGGTCATGAC AGTTCATGCG GAACCTTATA AAAGCTTTAT CGATAGAGAT
AATTGTTTTC GAGAAAATTC TGTTTTAGAA AGTTATGCTA AATTAAAACC AGTTTTTGAT
CGCAAGCATG GCACAGTTAC CGCTGCTACA AGTACGCCGT TGACCGATGG TGGTGCAGCT
ATCCTACTAA TGCGTGAAGG ACGAGCGAAA GAGCTAGGTT ATAAACCATT AGGCTATATT
CGTAGTTTTG GTTTTGCTGC CATCGATGTT TGGCAAGACA TGCTCATGGG TCCAAGTTAT
GCCACACCTA TTGCATTACA ACGTGCGGGC ATGAATTTAG CTGATTTAGA TTTGATTGAA
ATGCATGAAG CATTTGCAGC CCAAGCATTA GCGAACATGA AAATGTTCGG TAGTACTAAG
TTTGCTCAAG AGCAACTTGG CAGAGATAAA GCTATTGGTG ACATTGATAT GGATAAATTT
AATGTTATGG GTGGCTCGCT CGCCTATGGA CACCCTTTTG CTGCTACGGG TGCAAGACTT
ATCACACAAA CCCTTAATGA ATTAAACCGT CGTGGTGGTG GTGTTGGTTT AACAACAGCT
TGTGCTGCAG GTGGTTTAGG CGCGGCAATG ATTGTGGAGA CAGACTAA
|
|---|
| Protein sequence | MTIKRLTTST GERIAIVAGL RTPFAKQATA FHGVPAVDLG KIVVNELLQK HDVDPGIIDQ
LVFGQVVQMP EAPNIAREIV LGTGMNTRTD AYSVSRACAT SFQSTVNVAE SIMAGHVDVG
IAGGADSSSV APIGVSKKLA RTLVDLTKAR SLGQRLSLLS RLGLKDLLPV SPAVAEYSTG
ISMGQTAEQM AKTYQISRQD QDALAHRSHT LATKSWQEGK LAGEVMTVHA EPYKSFIDRD
NCFRENSVLE SYAKLKPVFD RKHGTVTAAT STPLTDGGAA ILLMREGRAK ELGYKPLGYI
RSFGFAAIDV WQDMLMGPSY ATPIALQRAG MNLADLDLIE MHEAFAAQAL ANMKMFGSTK
FAQEQLGRDK AIGDIDMDKF NVMGGSLAYG HPFAATGARL ITQTLNELNR RGGGVGLTTA
CAAGGLGAAM IVETD
|
|---|
| |