Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3150 |
Symbol | aroC |
ID | 3520172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3278764 |
End bp | 3279885 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637285600 |
Product | chorismate synthase |
Protein accession | YP_269847 |
Protein GI | 71279712 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGTA ATACCTTCGG AAAATTATTC ACAGTCACCT CATTTGGTGA AAGTCATGGA TTAGGATTAG GCGCCATTAT CGATGGTTGT CCACCAGGGC TTGAGTTAAC TGAAGCTGAC TTACAAATTG ATTTAGACAG ACGTCGCCCT GGCACCTCTC GATATACTAC TGCTCGCAGA GAAGCGGATG AAGTAAAAAT TCTTTCAGGT GTATTCGAAG GTAAAACCAC AGGCACGCCT ATTGGTTTAA TGATTGAAAA TACCGACCAA CGTTCAAAAG ATTATGGCAA CATTGCTGAC AGTTTCCGTC CGGGTCACGC AGATTACACT TACTGGCAAA AATACGGACT ACGTGACTAT CGAGGTGGTG GACGTTCTTC TGCACGTGAA ACAGCGATGC GTGTTGCTGC CGGCGCAATA GCAAAAAAAT ACCTCGCTGA AAAATTTGGC ATGACCATTC AAGCCTGTGT TACTCAAATT GGCGATATTG TTGCCAGTGG TCCAAAGGGT GCTCCGTTTG ATGTTAATAC CGTTGATTGG TCGAGCGTAG AAGACAACCC ATTCTTCTTC CCTGATGAAA CTAAAATTGA ACAACTTGGT GAGTACCTTC GTGACATCAT TAAAGAAAAA GACTCTATTG GCGCGAAAGT GACTGTTGTA GCCACTAATG TACCTGTTGG CTTAGGCGAG CCTATCTTTG ACCGTTTAGA TGCTGATATT GCTCATGGTT TGATGAGTAT CAATGCCGTA AAAGGTGTTG AGGTCGGTGA TGGTTTTGCC GTAGTAAATC AAAAAGGCTC AGAGCACAGA GATGAACTTA CCCCTGAAGG TTTTTCAACA AACCACTCAG GTGGTGTTTT AGGTGGTATT TCATCAGGTC AGCAAATTAT TGCGCATTTG GCTCTTAAAC CAACTTCAAG TATTGGTGTA AGTGGTAAAA CGGTTAATTT AACGGGCGAA GCGACGGACA TCATCACCAA AGGTCGTCAT GACCCTTGTG TCGGTATTCG CGCTGTACCT ATTGCTGAAG CAATGTTAGC GTTGACCTTA ATGGATCACT TCCTTCGTCA TCGTGGGCAA AATGCTGATG TTCAATGTAA TACACCTGAC ATTGAAGCAT AA
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Protein sequence | MSGNTFGKLF TVTSFGESHG LGLGAIIDGC PPGLELTEAD LQIDLDRRRP GTSRYTTARR EADEVKILSG VFEGKTTGTP IGLMIENTDQ RSKDYGNIAD SFRPGHADYT YWQKYGLRDY RGGGRSSARE TAMRVAAGAI AKKYLAEKFG MTIQACVTQI GDIVASGPKG APFDVNTVDW SSVEDNPFFF PDETKIEQLG EYLRDIIKEK DSIGAKVTVV ATNVPVGLGE PIFDRLDADI AHGLMSINAV KGVEVGDGFA VVNQKGSEHR DELTPEGFST NHSGGVLGGI SSGQQIIAHL ALKPTSSIGV SGKTVNLTGE ATDIITKGRH DPCVGIRAVP IAEAMLALTL MDHFLRHRGQ NADVQCNTPD IEA
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