| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3111 |
|---|
| Symbol | |
|---|
| ID | 3521283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 3254858 |
|---|
| End bp | 3256015 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637285562 |
|---|
| Product | alcohol dehydrogenase, iron-containing |
|---|
| Protein accession | YP_269809 |
|---|
| Protein GI | 71280814 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAATT TCAGTTTTAA AAACCCAACC CGTATTCATT TTGGTGAAGG GCAAATTGCC
GCTATTTCCA AAGAAATCCC TTTAGACGCT CGAGTATTAT TGGTTTATGG CGGTGGTTCA
ATTAAAGGTA ATGGCGTCTA TCAACAAGTG AGTGATGCAC TTACAGAACA TACTTGGTTT
GAATTTTCAG GTATCGAACC AAATCCAACC TATGACACTT TGATGAAAGC GCAAGAAATA
ATTAAAACAG AAAACATTGA TTATTTACTT GCTGTTGGTG GCGGCTCAGT TGTAGATGGC
GCTAAATTTA TTGCCGCAGC TGCACTTTAT GAAGGTGACG ATGCTTGGGA TATTCTTGCT
AAACAGCAAG CCGTCACAAA AGCATTACCT ATTGGCGCGA TATTAACCTT GCCTGCAACA
GGCTCTGAAA GTAATGGCAA CGCAGTGGTA ACACGTGATG GTAATAAACT ACCTTTCAAG
AGTCCTTTGC TTTGTCCATT ATTTGCGGTG TTAGACCCTA ACGTGACCTT GTCATTATCA
GATCGTCAAA TCAGTAATGG CGTTGTTGAT GCCTTTATTC ATACCATTGA ACAGTATTTA
ACTTACAGTG TAAATGGCAA AGTGCAAGAT CGTTTCAGTG AAGGTTTAAT GCAAACCTTG
ATTGAAGAAG GGCCTAAAGC GTTGTTACCT GAGACTAAAA AAAACTTAGA AGTTCGAGCC
AATATTATGT GGTCGGCAAC GATGGCGTTA AATGGTCTTA TCGGCGCGGG TGTACCACAA
GATTGGTCAA CGCATATGAT AGGTCATGAA CTTACCGGTG CTTTTGGTAT CGACCATGCA
CGCACTCTAT CCATTGTATT GCCTGCGGTA ATGAAAGTTC GTAAAGAGCA AAAACGTGAA
AAGTTACTAC AATATGCAGC GCGCGTTTGG CAGATAACTG ATGGTGAAGA CAACGCACGT
ATTGACCAAG CGATCCGTTT AACTGAAGAG TTCTTCGAAA CAATGCAAGT ACCAACACGT
TTATCCCACG TGGATCTTGG TAGCAAAGAT ATCGACTTGC TGATTGAACG ATTAGAGCAA
CATGGTATGA CGGCATTGGG CGAAAATGAC GATATTACCT TAGCAATAAG CCGTGAGATT
TTATCTCAAG CATTGTAA
|
|---|
| Protein sequence | MLNFSFKNPT RIHFGEGQIA AISKEIPLDA RVLLVYGGGS IKGNGVYQQV SDALTEHTWF
EFSGIEPNPT YDTLMKAQEI IKTENIDYLL AVGGGSVVDG AKFIAAAALY EGDDAWDILA
KQQAVTKALP IGAILTLPAT GSESNGNAVV TRDGNKLPFK SPLLCPLFAV LDPNVTLSLS
DRQISNGVVD AFIHTIEQYL TYSVNGKVQD RFSEGLMQTL IEEGPKALLP ETKKNLEVRA
NIMWSATMAL NGLIGAGVPQ DWSTHMIGHE LTGAFGIDHA RTLSIVLPAV MKVRKEQKRE
KLLQYAARVW QITDGEDNAR IDQAIRLTEE FFETMQVPTR LSHVDLGSKD IDLLIERLEQ
HGMTALGEND DITLAISREI LSQAL
|
|---|
| |