Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3084 |
Symbol | |
ID | 3521275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3213917 |
End bp | 3214843 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637285535 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_269782 |
Protein GI | 71280806 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAGCCCA TTATTCAAAT CACAGACGTT AATAAAGTTT ATGCTAGTGG CTTTCAAGCA CTTAATAATA TTAACTTATT AATAAAACCC GCTGAAATCT TTGCCTTATT AGGGCCAAAT GGTGCAGGTA AAACGACACT CATTAGTACT ATTTGCGGCA TTGTTGATGC TACCTCTGGG AAAATTACTG TTGATGGTAA AGATATTGTC TCAGGTTACC GACATACGCG TGAACTTATT GGTTTAGTGC CGCAAGAGTT AACCACCGAT GCTTTTGAAA CAGTATGGGC GACGGTTTCA TTTAGTCGTG GATTATTTGG TAAAAAATCG AATCCTGCTT TTATTGAGAA AACACTTAAA TCATTGTCCC TTTGGGATAA AAAAGACAAT CGCATGATGG AGTTATCTGG TGGTATGAAA CGCAGAGTGA TGATTGCTAA AGCACTCTCT CATGAACCTT CTATTTTATT TTTAGATGAG CCTACTGCTG GCGTTGATGT AGAGTTGCGC AAAGACATGT GGCAATTGGT ACGACAATTA CGAAACGATG GTGTGACTAT TATTTTAACC ACACATTATA TTGAAGAAGC GGAAGAAATA GCAGACCGTA TTGGTGTCAT TAAAAATGGT CAACTTATAT TGGTTGAAGA TAAAACAGCT TTAATGAATC AACTAGGTAA AAAGCAATTG ATTCTCGATT TAAAAGAGCC ATTAACTGAA ATACCTGCAA ATATGGCTGA TTTTAATTTA CAGATTAAAA ATGATGGACA GCAATTAATT TATAGTTATG ACACCACTGA AGAGCACACT GGGATTTCTG CTTTACTTCA GCAGTTGTCC GCAGCAAGTA TTGGGTTTAA AGATATCAAA ACAGATCAAA GCTCGTTGGA AGATATATTT GTCTCGTTAG TAAGGGAATC AACATGA
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Protein sequence | MQPIIQITDV NKVYASGFQA LNNINLLIKP AEIFALLGPN GAGKTTLIST ICGIVDATSG KITVDGKDIV SGYRHTRELI GLVPQELTTD AFETVWATVS FSRGLFGKKS NPAFIEKTLK SLSLWDKKDN RMMELSGGMK RRVMIAKALS HEPSILFLDE PTAGVDVELR KDMWQLVRQL RNDGVTIILT THYIEEAEEI ADRIGVIKNG QLILVEDKTA LMNQLGKKQL ILDLKEPLTE IPANMADFNL QIKNDGQQLI YSYDTTEEHT GISALLQQLS AASIGFKDIK TDQSSLEDIF VSLVREST
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