Gene CPS_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_3080 
Symbol 
ID3520529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp3210763 
End bp3211452 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content38% 
IMG OID637285531 
Producthypothetical protein 
Protein accessionYP_269778 
Protein GI71280066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.365355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCAG ATGAAGAATA TGTTCTTGCG ACCCTAGCGT CTAAATTCGG TGGTAAATAT 
ATCGATGGCG AAGATCCGCC AGACGGTTAT TTACTACTAA ATGACCGGAG AATTGCCGTA 
GAAGTTACCA AACTGGTTGA GCACATAAAT GAAAATGGAA AACGACGTTC AAGGTTGGCA 
GATGATGTGC CAATCTCAAA TATCGTCGAA CAGTTAAATG AAGAAATAGG CAACCTAATT 
CCTAAAAACC GATGGATTCA TCTTGTTATT CCCAGCCCAA TTAAGGGGAT CAATGAATTT 
AAAAAAGAAC TGACCCGAAT AATTCTCAAC ATGATTGCGA CCAAGACACA TGACTCAGTG 
ATAGACATTT TAGGTTATGT GGTATCAATC AATTTATATA AGTGTCAATA CCCGCCAAAG 
AAAAAAGTGG TTCAGTCAAT TGCCACTAAA TTTGCTTCGA CAAACATTCA GGAAAACACC 
CAATTCCTTT TAGAAAACCG GATCAGCATC AAGAATCAAA AATGCAATGC CAATGGTGAT 
GTAGATGAAT ATTGGCTGGC ACTCTTTAAT ACTTATTGCA TGGCCGACGT TGATTCATAT 
CGGGGAGCCT ATGATTCTCT AAAATTAGTG CATAATTTTA GTAAAATCTA CCTAATTGAT 
GGATATCGAC GTGTTTATAA ATTGTACTGA
 
Protein sequence
MRPDEEYVLA TLASKFGGKY IDGEDPPDGY LLLNDRRIAV EVTKLVEHIN ENGKRRSRLA 
DDVPISNIVE QLNEEIGNLI PKNRWIHLVI PSPIKGINEF KKELTRIILN MIATKTHDSV 
IDILGYVVSI NLYKCQYPPK KKVVQSIATK FASTNIQENT QFLLENRISI KNQKCNANGD 
VDEYWLALFN TYCMADVDSY RGAYDSLKLV HNFSKIYLID GYRRVYKLY