| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3052 |
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| Symbol | acoA |
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| ID | 3521967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 3188653 |
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| End bp | 3189639 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637285503 |
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| Product | TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit |
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| Protein accession | YP_269750 |
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| Protein GI | 71281495 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.306081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTACCCA CAGAATCACA GCGTATCTGG ATGTATCGCA ATATGTTGAT TAGCCGTTAT
ATGGAAGAAC GTATTGAAAG TATTTATATG GAGGGGAAGA AGCCTGTTTT TAATATGGCC
AATGGTCCTA TTCCCGGAGA GATGCACCTT TCAAATGGTC AAGAGCCATG TGCCGTTGGC
GTATGCGCTC ATTTAAAGGC TGAAGATGTC GTTACCGCAA CCCATCGACC TCATCATATT
GCAGTCGCCA AAGGAGTTGA TCTTAATAAG ATGATGGCCG AAATATTTGG TAAAAAAACA
GGATTAAGTG GTGGGCGAGG TGGTCATATG CACTTATTTG ATAACGATGT TAATTTCGCT
TGTTCGGGCA TTATCGCACA AGGTATGGGA CCAGCAGTTG GCGCAGCTTT ATCTCGAAAA
TTACAAAAAA AATCGGGCAT CGCTATTTCT TATATTGGTG AAGGTGCGGC AAATCAGGGC
GCTTTTCATG AAACGCTTAA TTTAGCTTCA GTGTGGAAAT TACCTGTTAT TTTTATTATC
GAAGACAATG ATTGGGGCAT ATCAGTTGCG AAATCAACGT CGACGGCAGT TGAAAAAAAT
AGTATTCGTG CTGCCTCATA TGACATGCCA GGTATTCATA TTGAAGATAA TTGCCCCGAC
AAAATATTCA GTGCCACTAA AGAAGCGATT GAGCGAGCAC GACGTGGTGA AGGTCCAAGC
TTAATTGAAA TAAAAACATC CCGTTTGGCA GGACATTTCA TGGGCGATGC TGAAGATTAT
CGTCCAAAGG GCGAGAAAGA CAAACTCGTC AAAGAAGATC CTATTCCTAC TTATCGTCAA
AAGTTAATTG ATGCAAAAGT TATCACGCTA GATGATGATT TAGTACTTGT TGAAGAAACA
CAACAAATAG TTGAACAAGC TATTACCTTC GCCCGTGACA GTGAATATCC ACAACCAGAA
GAAGCCATGC TGCATGTGTT CGCTTAA
|
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| Protein sequence | MLPTESQRIW MYRNMLISRY MEERIESIYM EGKKPVFNMA NGPIPGEMHL SNGQEPCAVG
VCAHLKAEDV VTATHRPHHI AVAKGVDLNK MMAEIFGKKT GLSGGRGGHM HLFDNDVNFA
CSGIIAQGMG PAVGAALSRK LQKKSGIAIS YIGEGAANQG AFHETLNLAS VWKLPVIFII
EDNDWGISVA KSTSTAVEKN SIRAASYDMP GIHIEDNCPD KIFSATKEAI ERARRGEGPS
LIEIKTSRLA GHFMGDAEDY RPKGEKDKLV KEDPIPTYRQ KLIDAKVITL DDDLVLVEET
QQIVEQAITF ARDSEYPQPE EAMLHVFA
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